Difference between revisions of "TSS:Mm 101285.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:97051 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_145425 | |nearest_refseq=NM_145425 | ||
|nearest_unigene=Mm.138090 | |nearest_unigene=Mm.138090 | ||
| − | |num_trans= | + | |num_trans=17449 |
|species=mouse | |species=mouse | ||
|start=21572193 | |start=21572193 | ||
Latest revision as of 10:57, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 21572202 |
|---|---|
| End of the center position in the TSS region: | 21572203 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000102874.10 ENSMUST00000238916.1 |
|---|---|
| Distance: | 1 |
| Num_trans: | 17449 |
| All_trans: | MGI:97051 |
TATA-Box annotation
| Distance to TSS: | -79 |
|---|---|
| Nearest PromoterID: | NM_001364768 |
| Entrez ID: | 216560 |
| Nearest Unigene: | Mm.138090 |
| Nearest Refseq: | NM_145425 |
| Nearest Ensembl: | ENSMUSG00000020319 |
| Gene Name: | malate dehydrogenase 1, NAD (soluble) |
| Gene Alias: | AV249152|Frtz|homolog-13 |
| Gene Description: | WD repeat containing planar cell polarity effector |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(GTTTTTAAAAGG,-,0.00) |
