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Difference between revisions of "TSS:Mm 101321.1"

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Line 9: Line 9:
 
|BGnT2=
 
|BGnT2=
 
|Beta3gnt=
 
|Beta3gnt=
|all_trans=AY043479:0 AK160088:-23 NM_016888:-55 ENSMUST00000189990.1:118 AF092050:150 ENSMUST00000062844.10:-421
+
|all_trans=MGI:1889505
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.15
 
|cpg_percent=0.15
Line 31: Line 31:
 
|nearest_refseq=NM_016888
 
|nearest_refseq=NM_016888
 
|nearest_unigene=Mm.395495
 
|nearest_unigene=Mm.395495
|num_trans=6
+
|num_trans=53625
 
|species=mouse
 
|species=mouse
 
|start=22859662
 
|start=22859662

Latest revision as of 10:57, 26 July 2021

Basic information about the TSS


TSS ID:mm_101321.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:22859662
End:22859680
Strand:-
TSS Score:1
Start of the center position in the TSS region:22859671
End of the center position in the TSS region:22859672



Gene and protein annotation


Transcript_name:AY043479
Distance:0
GeneID:53625
HGNC/MGI_ID:MGI:1889505
UniProt_ID:
Gene_name:UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
Gene_symbol:B3gnt2
Gene_synonyms:B3Galt6 B3gnt1
Gene_source:MGI:1889505



Transcript annotation


Transcript_name:AY043479
Distance:0
Num_trans:53625
All_trans:MGI:1889505



TATA-Box annotation


Distance to TSS:64
Nearest PromoterID:NM_016888
Entrez ID:53625
Nearest Unigene:Mm.395495
Nearest Refseq:NM_016888
Nearest Ensembl:ENSMUSG00000051650
Gene Name:UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
Gene Alias:AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt
Gene Description:UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
Gene Type:protein-coding
CpG%:0.15
GC%:0.771144
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):