Difference between revisions of "TSS:Mm 101329.1"
From referenceTSS
| Line 4: | Line 4: | ||
|U2af1-rs1= | |U2af1-rs1= | ||
|U2afbp-rs= | |U2afbp-rs= | ||
| − | |all_trans= | + | |all_trans=MGI:109474 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| − | |distance= | + | |distance=24 |
|distance_to_tss=-43 | |distance_to_tss=-43 | ||
|end=22972936 | |end=22972936 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_144514 | |nearest_refseq=NM_144514 | ||
|nearest_unigene=Mm.259903 | |nearest_unigene=Mm.259903 | ||
| − | |num_trans= | + | |num_trans=17846 |
|species=mouse | |species=mouse | ||
|start=22972882 | |start=22972882 | ||
|start_of_center_position=22972909 | |start_of_center_position=22972909 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENSMUST00000162924.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101329.1 | |tss_id=mm_101329.1 | ||
Latest revision as of 10:58, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 22972909 |
|---|---|
| End of the center position in the TSS region: | 22972910 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000162924.1 |
|---|---|
| Distance: | 24 |
| Num_trans: | 17846 |
| All_trans: | MGI:109474 |
TATA-Box annotation
| Distance to TSS: | -43 |
|---|---|
| Nearest PromoterID: | NM_001361661 |
| Entrez ID: | 17846 |
| Nearest Unigene: | Mm.259903 |
| Nearest Refseq: | NM_144514 |
| Nearest Ensembl: | ENSMUSG00000051355 |
| Gene Name: | COMM domain containing 1 |
| Gene Alias: | AI256843|Murr1|U2/Mu |
| Gene Description: | COMM domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
