Difference between revisions of "TSS:Mm 101346.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1918925 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_027860 | |nearest_refseq=NM_027860 | ||
|nearest_unigene=Mm.48031 | |nearest_unigene=Mm.48031 | ||
| − | |num_trans= | + | |num_trans=71675 |
|species=mouse | |species=mouse | ||
|start=23633621 | |start=23633621 | ||
|start_of_center_position=23633629 | |start_of_center_position=23633629 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000180260.7 ENSMUST00000141353.7 ENSMUST00000131612.1 | + | |transcript_name=ENSMUST00000180260.7 ENSMUST00000141353.7 ENSMUST00000131612.1 AK053838 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101346.1 | |tss_id=mm_101346.1 | ||
Latest revision as of 10:58, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 23633629 |
|---|---|
| End of the center position in the TSS region: | 23633630 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000180260.7 ENSMUST00000141353.7 ENSMUST00000131612.1 AK053838 |
|---|---|
| Distance: | 0 |
| Num_trans: | 71675 |
| All_trans: | MGI:1918925 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_027860 |
| Entrez ID: | 71675 |
| Nearest Unigene: | Mm.48031 |
| Nearest Refseq: | NM_027860 |
| Nearest Ensembl: | ENSMUSG00000042208 |
| Gene Name: | RIKEN cDNA 0610010F05 gene |
| Gene Alias: | Kiaa1841|mKIAA1841 |
| Gene Description: | RIKEN cDNA 0610010F05 gene |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
