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Difference between revisions of "TSS:Mm 101385.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC049163:-27 ENSMUST00000102863.2:-47 AK042629:-47 AK139065:-47 ENSMUST00000020513.9:-64 AK035810:-64 BC059271:-75 NM_172555:-81 DQ103505:100
+
|all_trans=MGI:2442119
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.07
 
|cpg_percent=0.07
Line 22: Line 22:
 
|nearest_refseq=NM_172555
 
|nearest_refseq=NM_172555
 
|nearest_unigene=Mm.470599
 
|nearest_unigene=Mm.470599
|num_trans=9
+
|num_trans=216578
 
|species=mouse
 
|species=mouse
 
|start=23895175
 
|start=23895175

Latest revision as of 10:59, 26 July 2021

Basic information about the TSS


TSS ID:mm_101385.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:23895175
End:23895189
Strand:-
TSS Score:1
Start of the center position in the TSS region:23895182
End of the center position in the TSS region:23895183



Gene and protein annotation


Transcript_name:BC049163
Distance:-27
GeneID:216578
HGNC/MGI_ID:MGI:2442119
UniProt_ID:
Gene_name:poly(A) polymerase gamma
Gene_symbol:Papolg
Gene_synonyms:9630006B20Rik
Gene_source:MGI:2442119



Transcript annotation


Transcript_name:BC049163
Distance:-27
Num_trans:216578
All_trans:MGI:2442119



TATA-Box annotation


Distance to TSS:88
Nearest PromoterID:NM_172555
Entrez ID:216578
Nearest Unigene:Mm.470599
Nearest Refseq:NM_172555
Nearest Ensembl:ENSMUSG00000020273
Gene Name:poly(A) polymerase gamma
Gene Alias:9630006B20Rik
Gene Description:poly(A) polymerase gamma
Gene Type:protein-coding
CpG%:0.07
GC%:0.562189
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):