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Difference between revisions of "TSS:Mm 101487.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|Stc2l=
 
|Stc2l=
|all_trans=ENSMUST00000020546.2:25 NM_011491:38 AF031035:38 ENSMUST00000152094.1:52 AF056244:191 BC012206:206 AK010318:224 AK002527:231
+
|all_trans=MGI:1316731
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.075
 
|cpg_percent=0.075
Line 24: Line 24:
 
|nearest_refseq=NM_011491
 
|nearest_refseq=NM_011491
 
|nearest_unigene=Mm.32506
 
|nearest_unigene=Mm.32506
|num_trans=8
+
|num_trans=20856
 
|species=mouse
 
|species=mouse
 
|start=31370098
 
|start=31370098

Latest revision as of 11:01, 26 July 2021

Basic information about the TSS


TSS ID:mm_101487.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:31370098
End:31370110
Strand:-
TSS Score:1
Start of the center position in the TSS region:31370104
End of the center position in the TSS region:31370105



Gene and protein annotation


Transcript_name:ENSMUST00000020546.2
Distance:25
GeneID:20856
HGNC/MGI_ID:MGI:1316731
UniProt_ID:Q5SS12
Gene_name:stanniocalcin 2
Gene_symbol:Stc2
Gene_synonyms:Stc2l mustc2
Gene_source:MGI:1316731



Transcript annotation


Transcript_name:ENSMUST00000020546.2
Distance:25
Num_trans:20856
All_trans:MGI:1316731



TATA-Box annotation


Distance to TSS:-43
Nearest PromoterID:NM_011491
Entrez ID:20856
Nearest Unigene:Mm.32506
Nearest Refseq:NM_011491
Nearest Ensembl:ENSMUSG00000020303
Gene Name:stanniocalcin 2
Gene Alias:AW125853|Stc-2|Stc2l|mustc2
Gene Description:stanniocalcin 2
Gene Type:protein-coding
CpG%:0.075
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):