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Difference between revisions of "TSS:Mm 101522.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000109365.7:-11 AK005748:-22 EU477371:32 NM_027050:-43 ENSMUST00000020508.3:-54
+
|all_trans=MGI:1916601
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 22: Line 22:
 
|nearest_refseq=NM_027050
 
|nearest_refseq=NM_027050
 
|nearest_unigene=Mm.65488
 
|nearest_unigene=Mm.65488
|num_trans=5
+
|num_trans=69351
 
|species=mouse
 
|species=mouse
 
|start=32824548
 
|start=32824548

Latest revision as of 11:02, 26 July 2021

Basic information about the TSS


TSS ID:mm_101522.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:32824548
End:32824551
Strand:-
TSS Score:1
Start of the center position in the TSS region:32824549
End of the center position in the TSS region:32824550



Gene and protein annotation


Transcript_name:ENSMUST00000109365.7
Distance:-11
GeneID:69351
HGNC/MGI_ID:MGI:1916601
UniProt_ID:A6PWJ8
Gene_name:small integral membrane protein 23
Gene_symbol:Smim23
Gene_synonyms:1700008A04Rik
Gene_source:MGI:1916601



Transcript annotation


Transcript_name:ENSMUST00000109365.7
Distance:-11
Num_trans:69351
All_trans:MGI:1916601



TATA-Box annotation


Distance to TSS:44
Nearest PromoterID:NM_027050
Entrez ID:69351
Nearest Unigene:Mm.65488
Nearest Refseq:NM_027050
Nearest Ensembl:ENSMUSG00000020270
Gene Name:small integral membrane protein 23
Gene Alias:1700008A04Rik
Gene Description:small integral membrane protein 23
Gene Type:protein-coding
CpG%:0.015
GC%:0.527363
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):