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Difference between revisions of "TSS:Mm 101530.1"

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Line 2: Line 2:
 
|NO38=
 
|NO38=
 
|Npm=
 
|Npm=
|all_trans=ENSMUST00000109354.9:0 ENSMUST00000101375.4:0 GU214027:0 AK145124:0 AK153901:0 AK028253:0 AK135517:0 AK145813:0 BC089546:0 AK165860:0 AK088923:0 AK005420:0 AK005498:0 AK150164:0 ENSMUST00000093201.12:1 AK028370:2 BC054755:14 BC090843:14 M33212:17 BC092378:32 BC085278:48 ENSMUST00000075641.9:-119 NM_008722:-119 NM_001252260:-119 NM_001252261:-119
+
|all_trans=MGI:106184
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 24: Line 24:
 
|nearest_refseq=NM_008722
 
|nearest_refseq=NM_008722
 
|nearest_unigene=Mm.485384
 
|nearest_unigene=Mm.485384
|num_trans=25
+
|num_trans=18148
 
|species=mouse
 
|species=mouse
 
|start=33163072
 
|start=33163072

Latest revision as of 11:02, 26 July 2021

Basic information about the TSS


TSS ID:mm_101530.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:33163072
End:33163087
Strand:-
TSS Score:1
Start of the center position in the TSS region:33163079
End of the center position in the TSS region:33163080



Gene and protein annotation


Transcript_name:ENSMUST00000109354.9 ENSMUST00000101375.4 GU214027 AK145124 AK153901 AK028253 AK135517 AK145813 BC089546 AK165860 AK088923 AK005420 AK005498 AK150164
Distance:0
GeneID:18148
HGNC/MGI_ID:MGI:106184
UniProt_ID:Q3U536 Q3UDA7 Q5SQB5 Q9DAY9
Gene_name:nucleophosmin 1
Gene_symbol:Npm1
Gene_synonyms:B23 NO38 nucleolar_protein_NO38
Gene_source:MGI:106184



Transcript annotation


Transcript_name:ENSMUST00000109354.9 ENSMUST00000101375.4 GU214027 AK145124 AK153901 AK028253 AK135517 AK145813 BC089546 AK165860 AK088923 AK005420 AK005498 AK150164
Distance:0
Num_trans:18148
All_trans:MGI:106184



TATA-Box annotation


Distance to TSS:126
Nearest PromoterID:NM_001252260
Entrez ID:18148
Nearest Unigene:Mm.485384
Nearest Refseq:NM_008722
Nearest Ensembl:ENSMUSG00000057113
Gene Name:nucleophosmin 1
Gene Alias:B23|NO38|Npm
Gene Description:nucleophosmin 1
Gene Type:protein-coding
CpG%:0.1
GC%:0.626866
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):