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Difference between revisions of "TSS:Mm 101536.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK016583:28 ENSMUST00000129179.7:30 AK035897:30 BC033503:32 ENSMUST00000037522.13:42 AK046865:42 AJ271458:46 BC148412:53 ENSMUST00000102815.9:-64 NR_110973:-71 NM_023146:-71 NM_001362875:-71
+
|all_trans=MGI:1929706
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.155
 
|cpg_percent=0.155
Line 22: Line 22:
 
|nearest_refseq=NM_023146
 
|nearest_refseq=NM_023146
 
|nearest_unigene=Mm.383775
 
|nearest_unigene=Mm.383775
|num_trans=12
+
|num_trans=66011
 
|species=mouse
 
|species=mouse
 
|start=33513671
 
|start=33513671

Latest revision as of 11:02, 26 July 2021

Basic information about the TSS


TSS ID:mm_101536.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:33513671
End:33513682
Strand:-
TSS Score:1
Start of the center position in the TSS region:33513676
End of the center position in the TSS region:33513677



Gene and protein annotation


Transcript_name:AK016583
Distance:28
GeneID:66011
HGNC/MGI_ID:MGI:1929706
UniProt_ID:
Gene_name:RAN binding protein 17
Gene_symbol:Ranbp17
Gene_synonyms:4932704E15Rik
Gene_source:MGI:1929706



Transcript annotation


Transcript_name:AK016583
Distance:28
Num_trans:66011
All_trans:MGI:1929706



TATA-Box annotation


Distance to TSS:76
Nearest PromoterID:NR_110973
Entrez ID:66011
Nearest Unigene:Mm.383775
Nearest Refseq:NM_023146
Nearest Ensembl:ENSMUSG00000040594
Gene Name:RAN binding protein 17
Gene Alias:-
Gene Description:RAN binding protein 17
Gene Type:protein-coding
CpG%:0.155
GC%:0.800995
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):