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Difference between revisions of "TSS:Mm 101614.1"

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Line 3: Line 3:
 
|AL033339=
 
|AL033339=
 
|AW985894=
 
|AW985894=
|all_trans=ENSMUST00000018992.3:0 AK076160:0 AK152108:0 AK166097:0 AK168194:0 AK011383:0 AK149856:0 AK160216:0 BC020132:7 NM_025936:-19 ENSMUST00000137815.1:32 AK220048:42
+
|all_trans=MGI:1914297
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.085
 
|cpg_percent=0.085
Line 25: Line 25:
 
|nearest_refseq=NM_025936
 
|nearest_refseq=NM_025936
 
|nearest_unigene=Mm.284906
 
|nearest_unigene=Mm.284906
|num_trans=12
+
|num_trans=104458
 
|species=mouse
 
|species=mouse
 
|start=35834492
 
|start=35834492

Latest revision as of 11:04, 26 July 2021

Basic information about the TSS


TSS ID:mm_101614.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:35834492
End:35834509
Strand:-
TSS Score:1
Start of the center position in the TSS region:35834500
End of the center position in the TSS region:35834501



Gene and protein annotation


Transcript_name:ENSMUST00000018992.3 AK076160 AK152108 AK166097 AK168194 AK011383 AK149856 AK160216
Distance:0
GeneID:104458
HGNC/MGI_ID:MGI:1914297
UniProt_ID:Q3TVC5 Q9D0I9
Gene_name:arginyl-tRNA synthetase
Gene_symbol:Rars
Gene_synonyms:2610011N19Rik 2610037E21Rik
Gene_source:MGI:1914297



Transcript annotation


Transcript_name:ENSMUST00000018992.3 AK076160 AK152108 AK166097 AK168194 AK011383 AK149856 AK160216
Distance:0
Num_trans:104458
All_trans:MGI:1914297



TATA-Box annotation


Distance to TSS:27
Nearest PromoterID:NM_025936
Entrez ID:104458
Nearest Unigene:Mm.284906
Nearest Refseq:NM_025936
Nearest Ensembl:ENSMUSG00000018848
Gene Name:arginyl-tRNA synthetase
Gene Alias:2610011N19Rik|2610037E21Rik|AL033339|AW985894
Gene Description:arginyl-tRNA synthetase
Gene Type:protein-coding
CpG%:0.085
GC%:0.626866
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):