Personal tools

Difference between revisions of "TSS:Mm 101726.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000206085.1:-28 ENSMUST00000020707.11:-48 ENSMUST00000132971.2:-48 NM_010250:-48 AK034095:-48 AK141596:70 BC137733:250 BC132331:253 M63436:261 ENSMUST00000169305.2:399 AK142450:399
+
|all_trans=MGI:95613
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.035
 
|cpg_percent=0.035
Line 22: Line 22:
 
|nearest_refseq=NM_010250
 
|nearest_refseq=NM_010250
 
|nearest_unigene=Mm.439668
 
|nearest_unigene=Mm.439668
|num_trans=11
+
|num_trans=14394
 
|species=mouse
 
|species=mouse
 
|start=42182858
 
|start=42182858

Latest revision as of 11:06, 26 July 2021

Basic information about the TSS


TSS ID:mm_101726.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:42182858
End:42182882
Strand:-
TSS Score:1
Start of the center position in the TSS region:42182870
End of the center position in the TSS region:42182871



Gene and protein annotation


Transcript_name:ENSMUST00000206085.1
Distance:-28
GeneID:14394
HGNC/MGI_ID:MGI:95613
UniProt_ID:A0A0U1RQ83
Gene_name:gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
Gene_symbol:Gabra1
Gene_synonyms:GABAAR_alpha1 GABAA_alpha_1 Gabra-1
Gene_source:MGI:95613



Transcript annotation


Transcript_name:ENSMUST00000206085.1
Distance:-28
Num_trans:14394
All_trans:MGI:95613



TATA-Box annotation


Distance to TSS:60
Nearest PromoterID:NM_010250
Entrez ID:14394
Nearest Unigene:Mm.439668
Nearest Refseq:NM_010250
Nearest Ensembl:ENSMUSG00000010803
Gene Name:gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
Gene Alias:GABAA-alpha1|GABAAR-alpha1|Gabra-1
Gene Description:gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
Gene Type:protein-coding
CpG%:0.035
GC%:0.492537
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):