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Difference between revisions of "TSS:Mm 101729.1"

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{{TSSDetail
 
{{TSSDetail
 
|Gabra-6=
 
|Gabra-6=
|all_trans=ENSMUST00000020703.12:0 ENSMUST00000155218.8:0 AK135145:0 AK137331:0 ENSMUST00000109286.3:-16 NM_008068:-16 NM_001099641:-16 NM_001359049:-16 X51986:38 BC145158:256 BC145702:256 AF256197:278 AF256198:278
+
|all_trans=MGI:95618
 
|alpha6=
 
|alpha6=
 
|chr=chr11
 
|chr=chr11
Line 24: Line 24:
 
|nearest_refseq=NM_008068
 
|nearest_refseq=NM_008068
 
|nearest_unigene=Mm.4915
 
|nearest_unigene=Mm.4915
|num_trans=13
+
|num_trans=14399
 
|species=mouse
 
|species=mouse
 
|start=42321045
 
|start=42321045

Latest revision as of 11:06, 26 July 2021

Basic information about the TSS


TSS ID:mm_101729.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:42321045
End:42321056
Strand:-
TSS Score:1
Start of the center position in the TSS region:42321050
End of the center position in the TSS region:42321051



Gene and protein annotation


Transcript_name:ENSMUST00000020703.12 ENSMUST00000155218.8 AK135145 AK137331
Distance:0
GeneID:14399
HGNC/MGI_ID:MGI:95618
UniProt_ID:P16305
Gene_name:gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6
Gene_symbol:Gabra6
Gene_synonyms:GABA-ARalpha6 Gabra-6 alpha6
Gene_source:MGI:95618



Transcript annotation


Transcript_name:ENSMUST00000020703.12 ENSMUST00000155218.8 AK135145 AK137331
Distance:0
Num_trans:14399
All_trans:MGI:95618



TATA-Box annotation


Distance to TSS:21
Nearest PromoterID:NM_001099641
Entrez ID:14399
Nearest Unigene:Mm.4915
Nearest Refseq:NM_008068
Nearest Ensembl:ENSMUSG00000020428
Gene Name:gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6
Gene Alias:GABA-ARalpha6|Gabra-6|alpha6
Gene Description:gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6
Gene Type:protein-coding
CpG%:0.015
GC%:0.422886
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):