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Difference between revisions of "TSS:Mm 101767.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000124306.1:-21 ENSMUST00000167574.1:-21 AK043877:-21 BC138653:37 BC138654:37 NM_007416:-178 AK139448:-178 Y12738:-492
+
|all_trans=MGI:104774
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.095
 
|cpg_percent=0.095
Line 22: Line 22:
 
|nearest_refseq=NM_007416
 
|nearest_refseq=NM_007416
 
|nearest_unigene=Mm.39086
 
|nearest_unigene=Mm.39086
|num_trans=8
+
|num_trans=11548
 
|species=mouse
 
|species=mouse
 
|start=43836243
 
|start=43836243

Latest revision as of 11:07, 26 July 2021

Basic information about the TSS


TSS ID:mm_101767.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:43836243
End:43836311
Strand:-
TSS Score:1
Start of the center position in the TSS region:43836277
End of the center position in the TSS region:43836278



Gene and protein annotation


Transcript_name:ENSMUST00000124306.1 ENSMUST00000167574.1 AK043877
Distance:-21
GeneID:11548
HGNC/MGI_ID:MGI:104774
UniProt_ID:Q9DBL0
Gene_name:adrenergic receptor, alpha 1b
Gene_symbol:Adra1b
Gene_synonyms:alpha1B-adrenergic_receptor
Gene_source:MGI:104774



Transcript annotation


Transcript_name:ENSMUST00000124306.1 ENSMUST00000167574.1 AK043877
Distance:-21
Num_trans:11548
All_trans:MGI:104774



TATA-Box annotation


Distance to TSS:212
Nearest PromoterID:NM_007416
Entrez ID:11548
Nearest Unigene:Mm.39086
Nearest Refseq:NM_007416
Nearest Ensembl:ENSMUSG00000050541
Gene Name:adrenergic receptor, alpha 1b
Gene Alias:[a]1b
Gene Description:adrenergic receptor, alpha 1b
Gene Type:protein-coding
CpG%:0.095
GC%:0.696517
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):