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Difference between revisions of "TSS:Mm 113629.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000221085.1:-16 AK079020:-16 ENSMUST00000221285.1:-17 NR_033545:-17 AK135068:-17
+
|all_trans=MGI:3641845
 
|chr=chr13
 
|chr=chr13
 
|cpg_percent=0.03
 
|cpg_percent=0.03
Line 22: Line 22:
 
|nearest_refseq=NR_033545
 
|nearest_refseq=NR_033545
 
|nearest_unigene=Mm.387093
 
|nearest_unigene=Mm.387093
|num_trans=5
+
|num_trans=100038577
 
|species=mouse
 
|species=mouse
 
|start=41865931
 
|start=41865931

Latest revision as of 15:28, 26 July 2021

Basic information about the TSS


TSS ID:mm_113629.1
Species:mouse
Chr:chr13
TSS Classification:no
Start:41865931
End:41865945
Strand:+
TSS Score:1
Start of the center position in the TSS region:41865938
End of the center position in the TSS region:41865939



Gene and protein annotation


Transcript_name:ENSMUST00000221085.1 AK079020
Distance:-16
GeneID:100038577
HGNC/MGI_ID:MGI:3641845
UniProt_ID:
Gene_name:predicted gene 10790
Gene_symbol:Gm10790
Gene_synonyms:
Gene_source:MGI:3641845



Transcript annotation


Transcript_name:ENSMUST00000221085.1 AK079020
Distance:-16
Num_trans:100038577
All_trans:MGI:3641845



TATA-Box annotation


Distance to TSS:23
Nearest PromoterID:NR_033545
Entrez ID:100038577
Nearest Unigene:Mm.387093
Nearest Refseq:NR_033545
Nearest Ensembl:ENSMUSG00000113856
Gene Name:predicted gene 10790
Gene Alias:-
Gene Description:predicted gene 10790
Gene Type:ncRNA
CpG%:0.03
GC%:0.482587
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):