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Difference between revisions of "TSS:Mm 135309.1"

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Line 3: Line 3:
 
|Cdgap=
 
|Cdgap=
 
|D330026I07Rik=
 
|D330026I07Rik=
|all_trans=ENSMUST00000124866.1:49 AK018057:49 ENSMUST00000132697.1:50 AK045213:50 NM_020260:-57 AK149975:78 AK150109:78 AK155729:93 AK170685:95 BC138870:108 AF151363:272 AK136348:-277 ENSMUST00000023487.4:-296 AK138417:-296 AK164669:395
+
|all_trans=MGI:1333857
 
|chr=chr16
 
|chr=chr16
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 25: Line 25:
 
|nearest_refseq=NM_020260
 
|nearest_refseq=NM_020260
 
|nearest_unigene=Mm.370848
 
|nearest_unigene=Mm.370848
|num_trans=15
+
|num_trans=12549
 
|species=mouse
 
|species=mouse
 
|start=38712947
 
|start=38712947

Latest revision as of 23:24, 26 July 2021

Basic information about the TSS


TSS ID:mm_135309.1
Species:mouse
Chr:chr16
TSS Classification:yes
Start:38712947
End:38712978
Strand:-
TSS Score:1
Start of the center position in the TSS region:38712962
End of the center position in the TSS region:38712963



Gene and protein annotation


Transcript_name:ENSMUST00000124866.1 AK018057
Distance:49
GeneID:12549
HGNC/MGI_ID:MGI:1333857
UniProt_ID:
Gene_name:Rho GTPase activating protein 31
Gene_symbol:Arhgap31
Gene_synonyms:CdGAP
Gene_source:MGI:1333857



Transcript annotation


Transcript_name:ENSMUST00000124866.1 AK018057
Distance:49
Num_trans:12549
All_trans:MGI:1333857



TATA-Box annotation


Distance to TSS:72
Nearest PromoterID:NM_020260
Entrez ID:12549
Nearest Unigene:Mm.370848
Nearest Refseq:NM_020260
Nearest Ensembl:ENSMUSG00000022799
Gene Name:Rho GTPase activating protein 31
Gene Alias:5830477L08Rik|AU041750|Cdgap|D330026I07Rik
Gene Description:Rho GTPase activating protein 31
Gene Type:protein-coding
CpG%:0.1
GC%:0.686567
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):