Personal tools

Difference between revisions of "TSS:Mm 137521.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000231637.1:0 NR_168745:0 NR_168746:0 NR_168743:0 NR_168742:0 NR_168739:0 NR_168740:0 NR_168741:0 NR_168744:0 ENSMUST00000232347.1:-3 ENSMUST00000232125.1:8 ENSMUST00000232171.1:-16 DQ701749:16 ENSMUST00000231336.1:-49 ENSMUST00000232675.1:-49 ENSMUST00000231462.1:-71 ENSMUST00000232070.1:-77 ENSMUST00000232363.1:-77 ENSMUST00000231707.1:-77 ENSMUST00000231262.1:-77 ENSMUST00000231770.1:-77 ENSMUST00000232497.1:-91 DQ562222:120 LF200981:155 MA436558:155 AK015366:156 ENSMUST00000232285.1:-160 DQ715499:165 DQ721369:183 DQ719327:305 DQ702378:305 DQ704721:308 DQ724271:335 DQ724422:382 LF250993:497 MA486570:497
+
|all_trans=MGI:3642687
 
|chr=chr17
 
|chr=chr17
 
|cpg_percent=0.04
 
|cpg_percent=0.04
Line 23: Line 23:
 
|nearest_refseq=NR_106075
 
|nearest_refseq=NR_106075
 
|nearest_unigene=
 
|nearest_unigene=
|num_trans=36
+
|num_trans=
 
|species=mouse
 
|species=mouse
 
|start=27325194
 
|start=27325194
 
|start_of_center_position=27325196
 
|start_of_center_position=27325196
 
|strand=+
 
|strand=+
|transcript_name=ENSMUST00000231637.1 NR_168745 NR_168746 NR_168743 NR_168742 NR_168739 NR_168740 NR_168741 NR_168744
+
|transcript_name=ENSMUST00000231637.1
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=mm_137521.1
 
|tss_id=mm_137521.1

Latest revision as of 00:12, 27 July 2021

Basic information about the TSS


TSS ID:mm_137521.1
Species:mouse
Chr:chr17
TSS Classification:yes
Start:27325194
End:27325198
Strand:+
TSS Score:1
Start of the center position in the TSS region:27325196
End of the center position in the TSS region:27325197



Gene and protein annotation


Transcript_name:ENSMUST00000231637.1
Distance:0
GeneID:100038429
HGNC/MGI_ID:MGI:3642687
UniProt_ID:
Gene_name:predicted gene 10505
Gene_symbol:Gm10505
Gene_synonyms:
Gene_source:MGI:3642687



Transcript annotation


Transcript_name:ENSMUST00000231637.1
Distance:0
Num_trans:
All_trans:MGI:3642687



TATA-Box annotation


Distance to TSS:-3189
Nearest PromoterID:NR_106075
Entrez ID:102466818
Nearest Unigene:
Nearest Refseq:NR_106075
Nearest Ensembl:ENSMUSG00000099237
Gene Name:predicted gene 10505
Gene Alias:Gm27555|mmu-mir-7216
Gene Description:microRNA 7216
Gene Type:ncRNA
CpG%:0.04
GC%:0.606965
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):