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Difference between revisions of "TSS:Mm 141633.1"

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{{TSSDetail
 
{{TSSDetail
 
|Cypf13=
 
|Cypf13=
|all_trans=ENSMUST00000234083.1:0 ENSMUST00000146718.1:0 AK085008:0 ENSMUST00000075253.12:-7 ENSMUST00000141325.1:-7 ENSMUST00000234532.1:10 ENSMUST00000139353.7:11 BC058330:11 ENSMUST00000234683.1:18 BC003954:20 ENSMUST00000137222.7:24 ENSMUST00000234946.1:29 NM_130882:29 AF233643:29 ENSMUST00000145683.1:30 ENSMUST00000234653.1:55
+
|all_trans=MGI:2158641
 
|chr=chr17
 
|chr=chr17
 
|cpg_percent=0.025
 
|cpg_percent=0.025
Line 23: Line 23:
 
|nearest_refseq=NM_130882
 
|nearest_refseq=NM_130882
 
|nearest_unigene=Mm.254838
 
|nearest_unigene=Mm.254838
|num_trans=16
+
|num_trans=170716
 
|species=mouse
 
|species=mouse
 
|start=32947389
 
|start=32947389

Latest revision as of 01:43, 27 July 2021

Basic information about the TSS


TSS ID:mm_141633.1
Species:mouse
Chr:chr17
TSS Classification:yes
Start:32947389
End:32947395
Strand:-
TSS Score:1
Start of the center position in the TSS region:32947392
End of the center position in the TSS region:32947393



Gene and protein annotation


Transcript_name:ENSMUST00000234083.1 ENSMUST00000146718.1 AK085008
Distance:0
GeneID:170716
HGNC/MGI_ID:MGI:2158641
UniProt_ID:A0A3Q4EBU2 Q8BUI1
Gene_name:cytochrome P450, family 4, subfamily f, polypeptide 13
Gene_symbol:Cyp4f13
Gene_synonyms:0610030I10Rik P450_CYP4F13 leukotriene_B4_omega_hydroxylase
Gene_source:MGI:2158641



Transcript annotation


Transcript_name:ENSMUST00000234083.1 ENSMUST00000146718.1 AK085008
Distance:0
Num_trans:170716
All_trans:MGI:2158641



TATA-Box annotation


Distance to TSS:-31
Nearest PromoterID:NM_130882
Entrez ID:170716
Nearest Unigene:Mm.254838
Nearest Refseq:NM_130882
Nearest Ensembl:ENSMUSG00000024055
Gene Name:cytochrome P450, family 4, subfamily f, polypeptide 13
Gene Alias:0610030I10Rik|Cypf13
Gene Description:cytochrome P450, family 4, subfamily f, polypeptide 13
Gene Type:protein-coding
CpG%:0.025
GC%:0.567164
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):