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Difference between revisions of "TSS:Mm 148758.1"

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Line 3: Line 3:
 
|ORF6=
 
|ORF6=
 
|Znhit2-ps=
 
|Znhit2-ps=
|all_trans=BC019440:-17 AK164029:-24 NM_013859:-31 AK086863:-31 AF119498:-41 ENSMUST00000162726.4:-46 BC092256:-46
+
|all_trans=MGI:1352481
 
|chr=chr19
 
|chr=chr19
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 25: Line 25:
 
|nearest_refseq=NM_013859
 
|nearest_refseq=NM_013859
 
|nearest_unigene=Mm.2310
 
|nearest_unigene=Mm.2310
|num_trans=7
+
|num_trans=29805
 
|species=mouse
 
|species=mouse
 
|start=6061237
 
|start=6061237

Latest revision as of 04:22, 27 July 2021

Basic information about the TSS


TSS ID:mm_148758.1
Species:mouse
Chr:chr19
TSS Classification:yes
Start:6061237
End:6061252
Strand:+
TSS Score:1
Start of the center position in the TSS region:6061244
End of the center position in the TSS region:6061245



Gene and protein annotation


Transcript_name:BC019440
Distance:-17
GeneID:29805
HGNC/MGI_ID:MGI:1352481
UniProt_ID:
Gene_name:zinc finger, HIT domain containing 2
Gene_symbol:Znhit2
Gene_synonyms:ORF6 Znhit2-ps
Gene_source:MGI:1352481



Transcript annotation


Transcript_name:BC019440
Distance:-17
Num_trans:29805
All_trans:MGI:1352481



TATA-Box annotation


Distance to TSS:38
Nearest PromoterID:NM_013859
Entrez ID:29805
Nearest Unigene:Mm.2310
Nearest Refseq:NM_013859
Nearest Ensembl:ENSMUSG00000075227
Gene Name:zinc finger, HIT domain containing 2
Gene Alias:C11orf5|Fon|ORF6|Znhit2-ps
Gene Description:zinc finger, HIT domain containing 2
Gene Type:protein-coding
CpG%:0.105
GC%:0.676617
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):