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Difference between revisions of "TSS:Mm 159059.1"

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Line 6: Line 6:
 
|Gm13190=
 
|Gm13190=
 
|OTTMUSG00000010806=
 
|OTTMUSG00000010806=
|all_trans=ENSMUST00000091497.10:0 BC058672:0 AK034706:-1 ENSMUST00000132710.2:-9 NM_172475:-9 AK163887:17
+
|all_trans=MGI:1919850
 
|chr=chr2
 
|chr=chr2
 
|cpg_percent=0.045
 
|cpg_percent=0.045
Line 29: Line 29:
 
|nearest_refseq=NM_172475
 
|nearest_refseq=NM_172475
 
|nearest_unigene=Mm.37932
 
|nearest_unigene=Mm.37932
|num_trans=6
+
|num_trans=209630
 
|species=mouse
 
|species=mouse
 
|start=4152871
 
|start=4152871

Latest revision as of 08:08, 27 July 2021

Basic information about the TSS


TSS ID:mm_159059.1
Species:mouse
Chr:chr2
TSS Classification:no
Start:4152871
End:4152872
Strand:+
TSS Score:1
Start of the center position in the TSS region:4152871
End of the center position in the TSS region:4152872



Gene and protein annotation


Transcript_name:ENSMUST00000091497.10 BC058672
Distance:0
GeneID:209630
HGNC/MGI_ID:MGI:1919850
UniProt_ID:Q8BIE6
Gene_name:FERM domain containing 4A
Gene_symbol:Frmd4a
Gene_synonyms:2700017I06Rik C230040M21Rik Gm13190
Gene_source:MGI:1919850



Transcript annotation


Transcript_name:ENSMUST00000091497.10 BC058672
Distance:0
Num_trans:209630
All_trans:MGI:1919850



TATA-Box annotation


Distance to TSS:9
Nearest PromoterID:NM_172475
Entrez ID:209630
Nearest Unigene:Mm.37932
Nearest Refseq:NM_172475
Nearest Ensembl:ENSMUSG00000026657
Gene Name:FERM domain containing 4A
Gene Alias:2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|mKIAA1294
Gene Description:FERM domain containing 4A
Gene Type:protein-coding
CpG%:0.045
GC%:0.59204
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):