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Difference between revisions of "TSS:Mm 161392.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC158114:18 BC158117:18 BC157952:20 BC172098:20 BC165991:93 ENSMUST00000068992.7:94
+
|all_trans=MGI:1306801
 
|chr=chr14
 
|chr=chr14
 
|cpg_percent=0.005
 
|cpg_percent=0.005
Line 22: Line 22:
 
|nearest_refseq=NM_001081377
 
|nearest_refseq=NM_001081377
 
|nearest_unigene=Mm.37126
 
|nearest_unigene=Mm.37126
|num_trans=6
+
|num_trans=211712
 
|species=mouse
 
|species=mouse
 
|start=93888825
 
|start=93888825

Latest revision as of 09:00, 27 July 2021

Basic information about the TSS


TSS ID:mm_161392.1
Species:mouse
Chr:chr14
TSS Classification:no
Start:93888825
End:93888826
Strand:-
TSS Score:1
Start of the center position in the TSS region:93888825
End of the center position in the TSS region:93888826



Gene and protein annotation


Transcript_name:BC158114 BC158117
Distance:18
GeneID:211712
HGNC/MGI_ID:MGI:1306801
UniProt_ID:B2RY66 B2RY69
Gene_name:protocadherin 9
Gene_symbol:Pcdh9
Gene_synonyms:1500001L12Rik A730003J17Rik C530050I23Rik C630029H24Rik LOC382930
Gene_source:MGI:1306801



Transcript annotation


Transcript_name:BC158114 BC158117
Distance:18
Num_trans:211712
All_trans:MGI:1306801



TATA-Box annotation


Distance to TSS:1843
Nearest PromoterID:NM_001081377
Entrez ID:211712
Nearest Unigene:Mm.37126
Nearest Refseq:NM_001081377
Nearest Ensembl:ENSMUSG00000055421
Gene Name:protocadherin 9
Gene Alias:-
Gene Description:protocadherin 9
Gene Type:protein-coding
CpG%:0.005
GC%:0.437811
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):