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Difference between revisions of "TSS:Mm 161499.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000226267.1:-58 BC037508:-75 ENSMUST00000227834.1:-121 AK008010:-121 ENSMUST00000228005.1:-185 ENSMUST00000227854.1:-199 ENSMUST00000049968.8:-450 NM_001013022:-450 BC087962:-450 ENSMUST00000228111.1:-478
+
|all_trans=MGI:1917363
 
|chr=chr15
 
|chr=chr15
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 22: Line 22:
 
|nearest_refseq=NM_001013022
 
|nearest_refseq=NM_001013022
 
|nearest_unigene=Mm.247273
 
|nearest_unigene=Mm.247273
|num_trans=10
+
|num_trans=70113
 
|species=mouse
 
|species=mouse
 
|start=89378803
 
|start=89378803

Latest revision as of 09:02, 27 July 2021

Basic information about the TSS


TSS ID:mm_161499.1
Species:mouse
Chr:chr15
TSS Classification:yes
Start:89378803
End:89378804
Strand:-
TSS Score:1
Start of the center position in the TSS region:89378803
End of the center position in the TSS region:89378804



Gene and protein annotation


Transcript_name:ENSMUST00000226267.1
Distance:-58
GeneID:70113
HGNC/MGI_ID:MGI:1917363
UniProt_ID:
Gene_name:outer dense fiber of sperm tails 3B
Gene_symbol:Odf3b
Gene_synonyms:2010001J22Rik
Gene_source:MGI:1917363



Transcript annotation


Transcript_name:ENSMUST00000226267.1
Distance:-58
Num_trans:70113
All_trans:MGI:1917363



TATA-Box annotation


Distance to TSS:450
Nearest PromoterID:NM_001013022
Entrez ID:70113
Nearest Unigene:Mm.247273
Nearest Refseq:NM_001013022
Nearest Ensembl:ENSMUSG00000047394
Gene Name:outer dense fiber of sperm tails 3B
Gene Alias:2010001J22Rik
Gene Description:outer dense fiber of sperm tails 3B
Gene Type:protein-coding
CpG%:0.105
GC%:0.686567
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):