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Difference between revisions of "TSS:Mm 163217.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000138229.1:-5 ENSMUST00000107282.3:136 ENSMUST00000151830.1:-371
+
|all_trans=MGI:1859650
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 22: Line 22:
 
|nearest_refseq=NM_019444
 
|nearest_refseq=NM_019444
 
|nearest_unigene=Mm.260698
 
|nearest_unigene=Mm.260698
|num_trans=3
+
|num_trans=54409
 
|species=mouse
 
|species=mouse
 
|start=101246937
 
|start=101246937

Latest revision as of 09:39, 27 July 2021

Basic information about the TSS


TSS ID:mm_163217.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:101246937
End:101246957
Strand:+
TSS Score:1
Start of the center position in the TSS region:101246947
End of the center position in the TSS region:101246948



Gene and protein annotation


Transcript_name:ENSMUST00000138229.1
Distance:-5
GeneID:54409
HGNC/MGI_ID:MGI:1859650
UniProt_ID:
Gene_name:receptor (calcitonin) activity modifying protein 2
Gene_symbol:Ramp2
Gene_synonyms:
Gene_source:MGI:1859650



Transcript annotation


Transcript_name:ENSMUST00000138229.1
Distance:-5
Num_trans:54409
All_trans:MGI:1859650



TATA-Box annotation


Distance to TSS:613
Nearest PromoterID:NM_019444
Entrez ID:54409
Nearest Unigene:Mm.260698
Nearest Refseq:NM_019444
Nearest Ensembl:ENSMUSG00000001240
Gene Name:receptor (calcitonin) activity modifying protein 2
Gene Alias:-
Gene Description:receptor (calcitonin) activity modifying protein 2
Gene Type:protein-coding
CpG%:0.015
GC%:0.522388
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):