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Difference between revisions of "TSS:Mm 172834.1"

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{{TSSDetail
 
{{TSSDetail
 
|E430034N22=
 
|E430034N22=
|all_trans=BC058587:16 ENSMUST00000215692.1:-24 ENSMUST00000215721.1:29 AK141572:29 ENSMUST00000213980.1:30 AK147986:30 AK088997:34 AK144127:34 ENSMUST00000217598.1:47 AK220447:47 ENSMUST00000165594.3:-149 ENSMUST00000115272.8:-161 NM_001205367:-161 NM_009859:-161 NM_001359738:273
+
|all_trans=MGI:1335094
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.13
 
|cpg_percent=0.13
Line 23: Line 23:
 
|nearest_refseq=NM_009859
 
|nearest_refseq=NM_009859
 
|nearest_unigene=Mm.270259
 
|nearest_unigene=Mm.270259
|num_trans=15
+
|num_trans=235072
 
|species=mouse
 
|species=mouse
 
|start=25252599
 
|start=25252599

Latest revision as of 13:07, 27 July 2021

Basic information about the TSS


TSS ID:mm_172834.1
Species:mouse
Chr:chr9
TSS Classification:yes
Start:25252599
End:25252619
Strand:+
TSS Score:1
Start of the center position in the TSS region:25252609
End of the center position in the TSS region:25252610



Gene and protein annotation


Transcript_name:BC058587
Distance:16
GeneID:235072
HGNC/MGI_ID:MGI:1335094
UniProt_ID:
Gene_name:septin 7
Gene_symbol:Septin7
Gene_synonyms:Cdc10 Sept7
Gene_source:MGI:1335094



Transcript annotation


Transcript_name:BC058587
Distance:16
Num_trans:235072
All_trans:MGI:1335094



TATA-Box annotation


Distance to TSS:170
Nearest PromoterID:NM_009859
Entrez ID:235072
Nearest Unigene:Mm.270259
Nearest Refseq:NM_009859
Nearest Ensembl:ENSMUSG00000001833
Gene Name:septin 7
Gene Alias:Cdc10|E430034N22
Gene Description:septin 7
Gene Type:protein-coding
CpG%:0.13
GC%:0.706468
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):