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Difference between revisions of "TSS:Mm 28110.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000191695.1:-31 AF126427:-31 AK144373:136 BC058730:194 ENSMUST00000077524.3:300 NM_011839:300 AK053645:300 BC046628:334
+
|all_trans=MGI:1346022
 
|chr=chr3
 
|chr=chr3
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 22: Line 22:
 
|nearest_refseq=NM_011839
 
|nearest_refseq=NM_011839
 
|nearest_unigene=Mm.389466
 
|nearest_unigene=Mm.389466
|num_trans=8
+
|num_trans=23937
 
|species=mouse
 
|species=mouse
 
|start=86548582
 
|start=86548582

Latest revision as of 17:15, 27 July 2021

Basic information about the TSS


TSS ID:mm_28110.1
Species:mouse
Chr:chr3
TSS Classification:yes
Start:86548582
End:86548598
Strand:-
TSS Score:1
Start of the center position in the TSS region:86548590
End of the center position in the TSS region:86548591



Gene and protein annotation


Transcript_name:ENSMUST00000191695.1 AF126427
Distance:-31
GeneID:23937
HGNC/MGI_ID:MGI:1346022
UniProt_ID:
Gene_name:mab-21-like 2
Gene_symbol:Mab21l2
Gene_synonyms:
Gene_source:MGI:1346022



Transcript annotation


Transcript_name:ENSMUST00000191695.1 AF126427
Distance:-31
Num_trans:23937
All_trans:MGI:1346022



TATA-Box annotation


Distance to TSS:-307
Nearest PromoterID:NM_011839
Entrez ID:23937
Nearest Unigene:Mm.389466
Nearest Refseq:NM_011839
Nearest Ensembl:ENSMUSG00000057777
Gene Name:mab-21-like 2
Gene Alias:-
Gene Description:mab-21-like 2
Gene Type:protein-coding
CpG%:0.02
GC%:0.492537
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):