Difference between revisions of "Template:TATABOX"
From referenceTSS
| Line 33: | Line 33: | ||
<hr width="200px" size="2" align="left" noshade> | <hr width="200px" size="2" align="left" noshade> | ||
<table class="inner" style="width: 600px;table-layout:fixed;"> | <table class="inner" style="width: 600px;table-layout:fixed;"> | ||
| − | <tr><th scope="row" class="item_label_long">TSS Score:</th><td class="ttb">[[tss_score::{{{tss_score}}} | + | <tr><th scope="row" class="item_label_long">TSS Score:</th><td class="ttb">[[tss_score::{{{tss_score}}}</td></tr> |
| − | <tr><th scope="row" class="item_label_long">Distance to TSS:</th><td class="ttb"> | + | <tr><th scope="row" class="item_label_long">Distance to TSS:</th><td class="ttb">{{{distance_to_tss}}}</td></tr> |
| − | <tr><th scope="row" class="item_label_long">Nearest PromoterID:</th><td class="ttb"> | + | <tr><th scope="row" class="item_label_long">Nearest PromoterID:</th><td class="ttb">{{{nearest_promoter_id}}}</td></tr> |
| − | <tr><th scope="row" class="item_label_long">Entrez ID:</th><td class="ttb"> | + | <tr><th scope="row" class="item_label_long">Entrez ID:</th><td class="ttb">{{{entrez_id}}}</td></tr> |
| − | <tr><th scope="row" class="item_label_long">Nearest Unigene:</th><td class="ttb"> | + | <tr><th scope="row" class="item_label_long">Nearest Unigene:</th><td class="ttb">{{{nearest_unigene}}}</td></tr> |
| − | <tr><th scope="row" class="item_label_long">Nearest Refseq:</th><td class="ttb"> | + | <tr><th scope="row" class="item_label_long">Nearest Refseq:</th><td class="ttb">{{{nearest_refseq}}}</td></tr> |
| − | <tr><th scope="row" class="item_label_long">Nearest Ensembl:</th><td class="ttb"> | + | <tr><th scope="row" class="item_label_long">Nearest Ensembl:</th><td class="ttb">{{{nearest_ensembl}}}</td></tr> |
| − | <tr><th scope="row" class="item_label_long">Gene Name:</th><td class="ttb"> | + | <tr><th scope="row" class="item_label_long">Gene Name:</th><td class="ttb">{{{gene_name}}}</td></tr> |
| − | <tr><th scope="row" class="item_label_long">Gene Alias:</th><td class="ttb"> | + | <tr><th scope="row" class="item_label_long">Gene Alias:</th><td class="ttb">{{{gene_alias}}}</td></tr> |
| − | <tr><th scope="row" class="item_label_long">Gene Description:</th><td class="ttb"> | + | <tr><th scope="row" class="item_label_long">Gene Description:</th><td class="ttb">{{{gene_description}}}</td></tr> |
| − | <tr><th scope="row" class="item_label_long">Gene Type:</th><td class="ttb"> | + | <tr><th scope="row" class="item_label_long">Gene Type:</th><td class="ttb">{{{gene_type}}}</td></tr> |
| − | <tr><th scope="row" class="item_label_long">CpG%:</th><td class="ttb"> | + | <tr><th scope="row" class="item_label_long">CpG%:</th><td class="ttb">{{{cpg_percent}}}</td></tr> |
| − | <tr><th scope="row" class="item_label_long">GC%:</th><td class="ttb"> | + | <tr><th scope="row" class="item_label_long">GC%:</th><td class="ttb">{{{gc_percent}}}</td></tr> |
| − | <tr><th scope="row" class="item_label_long">TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):</th><td class="ttb"> | + | <tr><th scope="row" class="item_label_long">TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):</th><td class="ttb">{{{tata_box}}}</td></tr> |
</table> | </table> | ||
{{#set:species={{{species}}}}} | {{#set:species={{{species}}}}} | ||
Revision as of 17:38, 14 February 2018
TATA-Box annotation
| TSS Score: | [[tss_score::{{{tss_score}}} |
|---|---|
| Distance to TSS: | {{{distance_to_tss}}} |
| Nearest PromoterID: | {{{nearest_promoter_id}}} |
| Entrez ID: | {{{entrez_id}}} |
| Nearest Unigene: | {{{nearest_unigene}}} |
| Nearest Refseq: | {{{nearest_refseq}}} |
| Nearest Ensembl: | {{{nearest_ensembl}}} |
| Gene Name: | {{{gene_name}}} |
| Gene Alias: | {{{gene_alias}}} |
| Gene Description: | {{{gene_description}}} |
| Gene Type: | {{{gene_type}}} |
| CpG%: | {{{cpg_percent}}} |
| GC%: | {{{gc_percent}}} |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | {{{tata_box}}} |
