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Difference between revisions of "TSS:Mm 49107.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|OTTMUSG00000029336=
 
|OTTMUSG00000029336=
|all_trans=ENSMUST00000162034.7:4 ENSMUST00000159378.7:-17 ENSMUST00000160705.7:50 ENSMUST00000159433.7:52 AK009885:52 EU711418:-60 ENSMUST00000161400.1:66 AK158918:-70 ENSMUST00000162564.6:72 AF374476:72 ENSMUST00000159335.7:-79 NM_001302353:-79 NM_001302354:-79
+
|all_trans=MGI:3840148
 
|chr=chr6
 
|chr=chr6
 
|cpg_percent=0.095
 
|cpg_percent=0.095
Line 23: Line 23:
 
|nearest_refseq=NM_001302353
 
|nearest_refseq=NM_001302353
 
|nearest_unigene=Mm.446106
 
|nearest_unigene=Mm.446106
|num_trans=13
+
|num_trans=100036521
 
|species=mouse
 
|species=mouse
 
|start=8259366
 
|start=8259366

Latest revision as of 00:58, 28 July 2021

Basic information about the TSS


TSS ID:mm_49107.1
Species:mouse
Chr:chr6
TSS Classification:yes
Start:8259366
End:8259378
Strand:+
TSS Score:1
Start of the center position in the TSS region:8259372
End of the center position in the TSS region:8259373



Gene and protein annotation


Transcript_name:ENSMUST00000162034.7
Distance:4
GeneID:100036521
HGNC/MGI_ID:MGI:3840148
UniProt_ID:E0CYC9
Gene_name:UMAP1-MVP12 associated (UMA) domain containing 1
Gene_symbol:Umad1
Gene_synonyms:Gm16039
Gene_source:MGI:3840148



Transcript annotation


Transcript_name:ENSMUST00000162034.7
Distance:4
Num_trans:100036521
All_trans:MGI:3840148



TATA-Box annotation


Distance to TSS:84
Nearest PromoterID:NM_001302354
Entrez ID:100036521
Nearest Unigene:Mm.446106
Nearest Refseq:NM_001302353
Nearest Ensembl:ENSMUSG00000089862
Gene Name:UMAP1-MVP12 associated (UMA) domain containing 1
Gene Alias:Gm16039
Gene Description:UMAP1-MVP12 associated (UMA) domain containing 1
Gene Type:protein-coding
CpG%:0.095
GC%:0.676617
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):