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Difference between revisions of "TSS:Mm 50626.1"

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Line 4: Line 4:
 
|EG14210=
 
|EG14210=
 
|Fin15=
 
|Fin15=
|all_trans=AK047380:-11
+
|all_trans=MGI:1927340
 
|chr=chr6
 
|chr=chr6
 
|cpg_percent=0
 
|cpg_percent=0
Line 26: Line 26:
 
|nearest_refseq=NM_018769
 
|nearest_refseq=NM_018769
 
|nearest_unigene=Mm.248361
 
|nearest_unigene=Mm.248361
|num_trans=1
+
|num_trans=56524
 
|species=mouse
 
|species=mouse
 
|start=50200172
 
|start=50200172

Latest revision as of 01:31, 28 July 2021

Basic information about the TSS


TSS ID:mm_50626.1
Species:mouse
Chr:chr6
TSS Classification:no
Start:50200172
End:50200177
Strand:+
TSS Score:1
Start of the center position in the TSS region:50200174
End of the center position in the TSS region:50200175



Gene and protein annotation


Transcript_name:AK047380
Distance:-11
GeneID:56524
HGNC/MGI_ID:MGI:1927340
UniProt_ID:
Gene_name:membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
Gene_symbol:Mpp6
Gene_synonyms:P55t Pals2
Gene_source:MGI:1927340



Transcript annotation


Transcript_name:AK047380
Distance:-11
Num_trans:56524
All_trans:MGI:1927340



TATA-Box annotation


Distance to TSS:61594
Nearest PromoterID:NM_018769
Entrez ID:54722
Nearest Unigene:Mm.248361
Nearest Refseq:NM_018769
Nearest Ensembl:ENSMUSG00000029821
Gene Name:membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
Gene Alias:2310037D07Rik|4932441K13Rik|Dfna5|Dfna5h|EG14210|Fin15
Gene Description:gasdermin E
Gene Type:protein-coding
CpG%:0
GC%:0.278607
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):