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Difference between revisions of "TSS:Mm 55316.1"

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Line 3: Line 3:
 
|CRFR2beta=
 
|CRFR2beta=
 
|Crfr2=
 
|Crfr2=
|all_trans=ENSMUST00000212633.1:0 AK142261:0 U19939:0 U21729:0 ENSMUST00000003568.14:-41 ENSMUST00000166954.1:-43 NM_001288618:-43 NM_009953:-43 AK085854:-43 BC137592:60 ENSMUST00000164012.2:118 U17858:118 FJ548565:118
+
|all_trans=MGI:894312
 
|chr=chr6
 
|chr=chr6
 
|cpg_percent=0.03
 
|cpg_percent=0.03
Line 25: Line 25:
 
|nearest_refseq=NM_009953
 
|nearest_refseq=NM_009953
 
|nearest_unigene=Mm.236081
 
|nearest_unigene=Mm.236081
|num_trans=13
+
|num_trans=12922
 
|species=mouse
 
|species=mouse
 
|start=55132958
 
|start=55132958

Latest revision as of 03:15, 28 July 2021

Basic information about the TSS


TSS ID:mm_55316.1
Species:mouse
Chr:chr6
TSS Classification:yes
Start:55132958
End:55132973
Strand:-
TSS Score:1
Start of the center position in the TSS region:55132965
End of the center position in the TSS region:55132966



Gene and protein annotation


Transcript_name:ENSMUST00000212633.1 AK142261 U19939 U21729
Distance:0
GeneID:12922
HGNC/MGI_ID:MGI:894312
UniProt_ID:A0A1D5RLK7
Gene_name:corticotropin releasing hormone receptor 2
Gene_symbol:Crhr2
Gene_synonyms:CRF-R2 CRFR2alpha CRFR2beta CRF_2_receptor CRH-R2 Crfr2
Gene_source:MGI:894312



Transcript annotation


Transcript_name:ENSMUST00000212633.1 AK142261 U19939 U21729
Distance:0
Num_trans:12922
All_trans:MGI:894312



TATA-Box annotation


Distance to TSS:50
Nearest PromoterID:NM_009953
Entrez ID:12922
Nearest Unigene:Mm.236081
Nearest Refseq:NM_009953
Nearest Ensembl:ENSMUSG00000003476
Gene Name:corticotropin releasing hormone receptor 2
Gene Alias:CRF-R2|CRFR2alpha|CRFR2beta|Crfr2
Gene Description:corticotropin releasing hormone receptor 2
Gene Type:protein-coding
CpG%:0.03
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):