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Difference between revisions of "TSS:Mm 78329.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|E430034N22=
 
|E430034N22=
|all_trans=ENSMUST00000165594.3:-55 ENSMUST00000215692.1:60 ENSMUST00000115272.8:-67 NM_001205367:-67 NM_009859:-67 BC058587:119 ENSMUST00000215721.1:132 AK141572:132 ENSMUST00000213980.1:133 AK147986:133 AK088997:137 AK144127:137 ENSMUST00000217598.1:150 AK220447:150 NM_001359738:376
+
|all_trans=MGI:1335094
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.15
 
|cpg_percent=0.15
Line 23: Line 23:
 
|nearest_refseq=NM_009859
 
|nearest_refseq=NM_009859
 
|nearest_unigene=Mm.270259
 
|nearest_unigene=Mm.270259
|num_trans=15
+
|num_trans=235072
 
|species=mouse
 
|species=mouse
 
|start=25252505
 
|start=25252505

Latest revision as of 11:44, 28 July 2021

Basic information about the TSS


TSS ID:mm_78329.1
Species:mouse
Chr:chr9
TSS Classification:yes
Start:25252505
End:25252516
Strand:+
TSS Score:1
Start of the center position in the TSS region:25252510
End of the center position in the TSS region:25252511



Gene and protein annotation


Transcript_name:ENSMUST00000165594.3
Distance:-55
GeneID:235072
HGNC/MGI_ID:MGI:1335094
UniProt_ID:E9Q1G8
Gene_name:septin 7
Gene_symbol:Septin7
Gene_synonyms:Cdc10 Sept7
Gene_source:MGI:1335094



Transcript annotation


Transcript_name:ENSMUST00000165594.3
Distance:-55
Num_trans:235072
All_trans:MGI:1335094



TATA-Box annotation


Distance to TSS:72
Nearest PromoterID:NM_009859
Entrez ID:235072
Nearest Unigene:Mm.270259
Nearest Refseq:NM_009859
Nearest Ensembl:ENSMUSG00000001833
Gene Name:septin 7
Gene Alias:Cdc10|E430034N22
Gene Description:septin 7
Gene Type:protein-coding
CpG%:0.15
GC%:0.721393
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):