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Difference between revisions of "TSS:Mm 78331.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|E430034N22=
 
|E430034N22=
|all_trans=ENSMUST00000215721.1:0 ENSMUST00000213980.1:0 AK141572:0 AK147986:0 AK088997:0 AK144127:0 BC058587:-4 ENSMUST00000217598.1:7 AK220447:7 ENSMUST00000215692.1:-63 ENSMUST00000165594.3:-188 ENSMUST00000115272.8:-200 NM_001205367:-200 NM_009859:-200 NM_001359738:233
+
|all_trans=MGI:1335094
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.135
 
|cpg_percent=0.135
Line 23: Line 23:
 
|nearest_refseq=NM_009859
 
|nearest_refseq=NM_009859
 
|nearest_unigene=Mm.270259
 
|nearest_unigene=Mm.270259
|num_trans=15
+
|num_trans=235072
 
|species=mouse
 
|species=mouse
 
|start=25252638
 
|start=25252638

Latest revision as of 11:44, 28 July 2021

Basic information about the TSS


TSS ID:mm_78331.1
Species:mouse
Chr:chr9
TSS Classification:yes
Start:25252638
End:25252659
Strand:+
TSS Score:1
Start of the center position in the TSS region:25252648
End of the center position in the TSS region:25252649



Gene and protein annotation


Transcript_name:ENSMUST00000215721.1 ENSMUST00000213980.1 AK141572 AK147986 AK088997 AK144127
Distance:0
GeneID:235072
HGNC/MGI_ID:MGI:1335094
UniProt_ID:Q3UGE0 Q3UNN1 Q8C2A3
Gene_name:septin 7
Gene_symbol:Septin7
Gene_synonyms:Cdc10 Sept7
Gene_source:MGI:1335094



Transcript annotation


Transcript_name:ENSMUST00000215721.1 ENSMUST00000213980.1 AK141572 AK147986 AK088997 AK144127
Distance:0
Num_trans:235072
All_trans:MGI:1335094



TATA-Box annotation


Distance to TSS:210
Nearest PromoterID:NM_009859
Entrez ID:235072
Nearest Unigene:Mm.270259
Nearest Refseq:NM_009859
Nearest Ensembl:ENSMUSG00000001833
Gene Name:septin 7
Gene Alias:Cdc10|E430034N22
Gene Description:septin 7
Gene Type:protein-coding
CpG%:0.135
GC%:0.741294
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):