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Difference between revisions of "TSS:Mm 79221.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|ENSMUSG00000079564=
 
|ENSMUSG00000079564=
|all_trans=ENSMUST00000215465.1:0 BC049643:0 ENSMUST00000068730.3:4 AK017085:4 ENSMUST00000216483.1:-25 NR_029465:-25 AK015955:-25
+
|all_trans=MGI:3642683
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.025
 
|cpg_percent=0.025
Line 23: Line 23:
 
|nearest_refseq=NR_029465
 
|nearest_refseq=NR_029465
 
|nearest_unigene=Mm.437541
 
|nearest_unigene=Mm.437541
|num_trans=7
+
|num_trans=100036537
 
|species=mouse
 
|species=mouse
 
|start=49518312
 
|start=49518312

Latest revision as of 12:03, 28 July 2021

Basic information about the TSS


TSS ID:mm_79221.1
Species:mouse
Chr:chr9
TSS Classification:yes
Start:49518312
End:49518332
Strand:+
TSS Score:1
Start of the center position in the TSS region:49518322
End of the center position in the TSS region:49518323



Gene and protein annotation


Transcript_name:ENSMUST00000215465.1 BC049643
Distance:0
GeneID:100036537
HGNC/MGI_ID:MGI:3642683
UniProt_ID:
Gene_name:predicted gene 11149
Gene_symbol:Gm11149
Gene_synonyms:
Gene_source:MGI:3642683



Transcript annotation


Transcript_name:ENSMUST00000215465.1 BC049643
Distance:0
Num_trans:100036537
All_trans:MGI:3642683



TATA-Box annotation


Distance to TSS:34
Nearest PromoterID:NR_029465
Entrez ID:100036537
Nearest Unigene:Mm.437541
Nearest Refseq:NR_029465
Nearest Ensembl:ENSMUSG00000079564
Gene Name:predicted gene 11149
Gene Alias:-
Gene Description:predicted gene 11149
Gene Type:ncRNA
CpG%:0.025
GC%:0.512438
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):