Difference between revisions of "TSS:Mm 8221.1"
From referenceTSS
| Line 6: | Line 6: | ||
|Lyt-4= | |Lyt-4= | ||
|T200= | |T200= | ||
| − | |all_trans= | + | |all_trans=MGI:2444749 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| Line 29: | Line 29: | ||
|nearest_refseq=NM_011210 | |nearest_refseq=NM_011210 | ||
|nearest_unigene=Mm.391573 | |nearest_unigene=Mm.391573 | ||
| − | |num_trans= | + | |num_trans=320791 |
|species=mouse | |species=mouse | ||
|start=138165188 | |start=138165188 | ||
Latest revision as of 13:08, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 138165194 |
|---|---|
| End of the center position in the TSS region: | 138165195 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK038155 |
|---|---|
| Distance: | -183 |
| Num_trans: | 320791 |
| All_trans: | MGI:2444749 |
TATA-Box annotation
| Distance to TSS: | 9932 |
|---|---|
| Nearest PromoterID: | NM_001111316 |
| Entrez ID: | 19264 |
| Nearest Unigene: | Mm.391573 |
| Nearest Refseq: | NM_011210 |
| Nearest Ensembl: | ENSMUSG00000026395 |
| Gene Name: | RIKEN cDNA A130071D04 gene |
| Gene Alias: | B220|CD45R|Cd45|L-CA|Ly-5|Lyt-4|T200|loc |
| Gene Description: | protein tyrosine phosphatase, receptor type, C |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -82(CCTTTAATACCA,+,0.00),18(CTGTTTAAAAAG,-,0.00) |
