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Difference between revisions of "TSS:Mm 83653.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|ENSMUSG00000079564=
 
|ENSMUSG00000079564=
|all_trans=X07244:21 LF306832:-329 MA542409:-329
+
|all_trans=MGI:97281
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.045
 
|cpg_percent=0.045
Line 23: Line 23:
 
|nearest_refseq=NR_029465
 
|nearest_refseq=NR_029465
 
|nearest_unigene=Mm.437541
 
|nearest_unigene=Mm.437541
|num_trans=3
+
|num_trans=17967
 
|species=mouse
 
|species=mouse
 
|start=49508625
 
|start=49508625

Latest revision as of 13:40, 28 July 2021

Basic information about the TSS


TSS ID:mm_83653.1
Species:mouse
Chr:chr9
TSS Classification:no
Start:49508625
End:49508641
Strand:-
TSS Score:1
Start of the center position in the TSS region:49508633
End of the center position in the TSS region:49508634



Gene and protein annotation


Transcript_name:X07244
Distance:21
GeneID:17967
HGNC/MGI_ID:MGI:97281
UniProt_ID:
Gene_name:neural cell adhesion molecule 1
Gene_symbol:Ncam1
Gene_synonyms:CD56 E-NCAM NCAM NCAM-1 NCAM-120 NCAM-140 NCAM-180
Gene_source:MGI:97281



Transcript annotation


Transcript_name:X07244
Distance:21
Num_trans:17967
All_trans:MGI:97281



TATA-Box annotation


Distance to TSS:-9655
Nearest PromoterID:NR_029465
Entrez ID:100036537
Nearest Unigene:Mm.437541
Nearest Refseq:NR_029465
Nearest Ensembl:ENSMUSG00000079564
Gene Name:neural cell adhesion molecule 1
Gene Alias:-
Gene Description:predicted gene 11149
Gene Type:ncRNA
CpG%:0.045
GC%:0.537313
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):