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Difference between revisions of "TSS:Mm 88060.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000099661.2:-19 AK133396:-19 LF198051:-20 MA433628:-20 LF222991:194 MA458568:194
+
|all_trans=MGI:3642860
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 22: Line 22:
 
|nearest_refseq=NR_155444
 
|nearest_refseq=NR_155444
 
|nearest_unigene=Mm.72938
 
|nearest_unigene=Mm.72938
|num_trans=6
+
|num_trans=100038508
 
|species=mouse
 
|species=mouse
 
|start=67572060
 
|start=67572060

Latest revision as of 15:17, 28 July 2021

Basic information about the TSS


TSS ID:mm_88060.1
Species:mouse
Chr:chr10
TSS Classification:no
Start:67572060
End:67572076
Strand:+
TSS Score:1
Start of the center position in the TSS region:67572068
End of the center position in the TSS region:67572069



Gene and protein annotation


Transcript_name:ENSMUST00000099661.2 AK133396
Distance:-19
GeneID:100038508
HGNC/MGI_ID:MGI:3642860
UniProt_ID:Q3V073
Gene_name:predicted gene 10797
Gene_symbol:Gm10797
Gene_synonyms:
Gene_source:MGI:3642860



Transcript annotation


Transcript_name:ENSMUST00000099661.2 AK133396
Distance:-19
Num_trans:100038508
All_trans:MGI:3642860



TATA-Box annotation


Distance to TSS:-109
Nearest PromoterID:NR_155444
Entrez ID:105245193
Nearest Unigene:Mm.72938
Nearest Refseq:NR_155444
Nearest Ensembl:
Gene Name:predicted gene 10797
Gene Alias:-
Gene Description:RIKEN cDNA 4930563J15 gene
Gene Type:ncRNA
CpG%:0.02
GC%:0.502488
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):