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Difference between revisions of "TSS:Mm 99236.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=NM_013792:0 AK143546:0 AK170758:0 AK158045:0 AK164125:0 BC055733:0 U85247:4 AK198468:12 AK044668:42 ENSMUST00000001802.9:-70 AK158774:-205 LF198884:-206 MA434461:-206 AK191264:342
+
|all_trans=MGI:1351641
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.075
 
|cpg_percent=0.075
Line 22: Line 22:
 
|nearest_refseq=NM_013792
 
|nearest_refseq=NM_013792
 
|nearest_unigene=Mm.95452
 
|nearest_unigene=Mm.95452
|num_trans=14
+
|num_trans=27419
 
|species=mouse
 
|species=mouse
 
|start=101070081
 
|start=101070081
 
|start_of_center_position=101070101
 
|start_of_center_position=101070101
 
|strand=+
 
|strand=+
|transcript_name=NM_013792 AK143546 AK170758 AK158045 AK164125 BC055733
+
|transcript_name=AK143546 AK170758 AK158045 AK164125 BC055733
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=mm_99236.1
 
|tss_id=mm_99236.1

Latest revision as of 19:21, 28 July 2021

Basic information about the TSS


TSS ID:mm_99236.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:101070081
End:101070121
Strand:+
TSS Score:1
Start of the center position in the TSS region:101070101
End of the center position in the TSS region:101070102



Gene and protein annotation


Transcript_name:AK143546 AK170758 AK158045 AK164125 BC055733
Distance:0
GeneID:27419
HGNC/MGI_ID:MGI:1351641
UniProt_ID:O88325
Gene_name:alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
Gene_symbol:Naglu
Gene_synonyms:
Gene_source:MGI:1351641



Transcript annotation


Transcript_name:AK143546 AK170758 AK158045 AK164125 BC055733
Distance:0
Num_trans:27419
All_trans:MGI:1351641



TATA-Box annotation


Distance to TSS:7
Nearest PromoterID:NM_013792
Entrez ID:27419
Nearest Unigene:Mm.95452
Nearest Refseq:NM_013792
Nearest Ensembl:ENSMUSG00000001751
Gene Name:alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
Gene Alias:-
Gene Description:alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
Gene Type:protein-coding
CpG%:0.075
GC%:0.686567
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):