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Difference between revisions of "TSS:Mm 99248.1"

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Line 3: Line 3:
 
|Ppat=
 
|Ppat=
 
|Ukr1=
 
|Ukr1=
|all_trans=BC064753:-21 AF521095:-33 AK166894:-67 ENSMUST00000107308.3:-73 AK159912:-73 ENSMUST00000151056.7:-80 AK159405:-81 AK170330:-82 AK004878:-92 ENSMUST00000001806.9:-133 NM_001305982:-133 NR_155015:-133 LF198886:-134 MA434463:-134 BC156119:301 BC157111:301
+
|all_trans=MGI:1918993
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.06
 
|cpg_percent=0.06
Line 25: Line 25:
 
|nearest_refseq=NM_027896
 
|nearest_refseq=NM_027896
 
|nearest_unigene=Mm.182271
 
|nearest_unigene=Mm.182271
|num_trans=16
+
|num_trans=71743
 
|species=mouse
 
|species=mouse
 
|start=101082697
 
|start=101082697

Latest revision as of 19:22, 28 July 2021

Basic information about the TSS


TSS ID:mm_99248.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:101082697
End:101082708
Strand:+
TSS Score:1
Start of the center position in the TSS region:101082702
End of the center position in the TSS region:101082703



Gene and protein annotation


Transcript_name:BC064753
Distance:-21
GeneID:71743
HGNC/MGI_ID:MGI:1918993
UniProt_ID:
Gene_name:Coenzyme A synthase
Gene_symbol:Coasy
Gene_synonyms:1300003G02Rik Dpck Ppat Ukr1
Gene_source:MGI:1918993



Transcript annotation


Transcript_name:BC064753
Distance:-21
Num_trans:71743
All_trans:MGI:1918993



TATA-Box annotation


Distance to TSS:138
Nearest PromoterID:NM_001305982
Entrez ID:71743
Nearest Unigene:Mm.182271
Nearest Refseq:NM_027896
Nearest Ensembl:ENSMUSG00000001755
Gene Name:Coenzyme A synthase
Gene Alias:1300003G02Rik|Dpck|Ppat|Ukr1
Gene Description:Coenzyme A synthase
Gene Type:protein-coding
CpG%:0.06
GC%:0.59204
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):