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Difference between revisions of "TSS:Mm 99260.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000129680.7:0 ENSMUST00000149006.1:268 NM_019444:290 BC036348:346 ENSMUST00000128260.8:347 AK003810:369 ENSMUST00000122006.7:385 AF146523:385 BC051201:385 BC069992:386 AF209906:387 AJ250490:387 ENSMUST00000149585.7:388
+
|all_trans=MGI:1859650
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.045
 
|cpg_percent=0.045
Line 22: Line 22:
 
|nearest_refseq=NM_019444
 
|nearest_refseq=NM_019444
 
|nearest_unigene=Mm.260698
 
|nearest_unigene=Mm.260698
|num_trans=13
+
|num_trans=54409
 
|species=mouse
 
|species=mouse
 
|start=101245996
 
|start=101245996

Latest revision as of 19:22, 28 July 2021

Basic information about the TSS


TSS ID:mm_99260.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:101245996
End:101246044
Strand:+
TSS Score:1
Start of the center position in the TSS region:101246020
End of the center position in the TSS region:101246021



Gene and protein annotation


Transcript_name:ENSMUST00000129680.7
Distance:0
GeneID:54409
HGNC/MGI_ID:MGI:1859650
UniProt_ID:Q9WUP0
Gene_name:receptor (calcitonin) activity modifying protein 2
Gene_symbol:Ramp2
Gene_synonyms:
Gene_source:MGI:1859650



Transcript annotation


Transcript_name:ENSMUST00000129680.7
Distance:0
Num_trans:54409
All_trans:MGI:1859650



TATA-Box annotation


Distance to TSS:-314
Nearest PromoterID:NM_019444
Entrez ID:54409
Nearest Unigene:Mm.260698
Nearest Refseq:NM_019444
Nearest Ensembl:ENSMUSG00000001240
Gene Name:receptor (calcitonin) activity modifying protein 2
Gene Alias:-
Gene Description:receptor (calcitonin) activity modifying protein 2
Gene Type:protein-coding
CpG%:0.045
GC%:0.641791
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):