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Difference between revisions of "TSS:Mm 99283.1"

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Line 4: Line 4:
 
|PA28gamma=
 
|PA28gamma=
 
|REGgamma=
 
|REGgamma=
|all_trans=ENSMUST00000151385.1:50 ENSMUST00000127998.1:96 AK196904:272 AK198462:272 AK184446:272 AK183517:272 AK182764:272 AK210357:276 AK183726:427 U60330:-466 CT010198:-471 AK179381:-481 AK180194:-481 AK178475:-482
+
|all_trans=MGI:1096366
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 26: Line 26:
 
|nearest_refseq=NM_011192
 
|nearest_refseq=NM_011192
 
|nearest_unigene=Mm.288477
 
|nearest_unigene=Mm.288477
|num_trans=14
+
|num_trans=19192
 
|pa28g=
 
|pa28g=
 
|species=mouse
 
|species=mouse

Latest revision as of 19:22, 28 July 2021

Basic information about the TSS


TSS ID:mm_99283.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:101316917
End:101316927
Strand:+
TSS Score:1
Start of the center position in the TSS region:101316922
End of the center position in the TSS region:101316923



Gene and protein annotation


Transcript_name:ENSMUST00000151385.1
Distance:50
GeneID:19192
HGNC/MGI_ID:MGI:1096366
UniProt_ID:A2A4J1
Gene_name:proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
Gene_symbol:Psme3
Gene_synonyms:Ki PA28gamma REGgamma pa28g
Gene_source:MGI:1096366



Transcript annotation


Transcript_name:ENSMUST00000151385.1
Distance:50
Num_trans:19192
All_trans:MGI:1096366



TATA-Box annotation


Distance to TSS:709
Nearest PromoterID:NM_011192
Entrez ID:19192
Nearest Unigene:Mm.288477
Nearest Refseq:NM_011192
Nearest Ensembl:ENSMUSG00000078652
Gene Name:proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
Gene Alias:AA410043|AU020960|Ki|PA28gamma|REGgamma|pa28g
Gene Description:proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
Gene Type:protein-coding
CpG%:0.02
GC%:0.552239
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):