Personal tools

Difference between revisions of "TSS:Mm 99317.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=AF214527:20 AK132027:23 AK146291:23 AK008120:26 AK012566:31 AK010627:34 AK002945:35 BC024366:37 BC082284:37 AK088211:41 ENSMUST00000139939.1:43 BC090395:46 ENSMUST00000107249.7:51 ENSMUST00000077856.12:-82 NM_011289:-135
+
|all_trans=MGI:98036
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.045
 
|cpg_percent=0.045
Line 22: Line 22:
 
|nearest_refseq=NM_011289
 
|nearest_refseq=NM_011289
 
|nearest_unigene=Mm.340658
 
|nearest_unigene=Mm.340658
|num_trans=15
+
|num_trans=19942
 
|species=mouse
 
|species=mouse
 
|start=101442379
 
|start=101442379

Latest revision as of 19:23, 28 July 2021

Basic information about the TSS


TSS ID:mm_99317.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:101442379
End:101442395
Strand:+
TSS Score:1
Start of the center position in the TSS region:101442387
End of the center position in the TSS region:101442388



Gene and protein annotation


Transcript_name:AF214527
Distance:20
GeneID:19942
HGNC/MGI_ID:MGI:98036
UniProt_ID:
Gene_name:ribosomal protein L27
Gene_symbol:Rpl27
Gene_synonyms:
Gene_source:MGI:98036



Transcript annotation


Transcript_name:AF214527
Distance:20
Num_trans:19942
All_trans:MGI:98036



TATA-Box annotation


Distance to TSS:142
Nearest PromoterID:NM_011289
Entrez ID:19942
Nearest Unigene:Mm.340658
Nearest Refseq:NM_011289
Nearest Ensembl:ENSMUSG00000063316
Gene Name:ribosomal protein L27
Gene Alias:-
Gene Description:ribosomal protein L27
Gene Type:protein-coding
CpG%:0.045
GC%:0.61194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):