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Difference between revisions of "TSS:Mm 9934.1"

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Line 3: Line 3:
 
|KMT3C=
 
|KMT3C=
 
|Zmynd14=
 
|Zmynd14=
|all_trans=ENSMUST00000027897.7:43 NM_026796:115 AK150857:115 AK145261:115 BC023119:118 ENSMUST00000144452.1:153 AK164053:153 AK204951:210 AK197062:212
+
|all_trans=MGI:1915889
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.145
 
|cpg_percent=0.145
Line 25: Line 25:
 
|nearest_refseq=NM_026796
 
|nearest_refseq=NM_026796
 
|nearest_unigene=Mm.156895
 
|nearest_unigene=Mm.156895
|num_trans=9
+
|num_trans=226830
 
|species=mouse
 
|species=mouse
 
|start=189922405
 
|start=189922405

Latest revision as of 19:24, 28 July 2021

Basic information about the TSS


TSS ID:mm_9934.1
Species:mouse
Chr:chr1
TSS Classification:yes
Start:189922405
End:189922416
Strand:-
TSS Score:1
Start of the center position in the TSS region:189922410
End of the center position in the TSS region:189922411



Gene and protein annotation


Transcript_name:ENSMUST00000027897.7
Distance:43
GeneID:226830
HGNC/MGI_ID:MGI:1915889
UniProt_ID:Q8R5A0
Gene_name:SET and MYND domain containing 2
Gene_symbol:Smyd2
Gene_synonyms:1110020E07Rik KMT3C Zmynd14
Gene_source:MGI:1915889



Transcript annotation


Transcript_name:ENSMUST00000027897.7
Distance:43
Num_trans:226830
All_trans:MGI:1915889



TATA-Box annotation


Distance to TSS:-120
Nearest PromoterID:NM_026796
Entrez ID:226830
Nearest Unigene:Mm.156895
Nearest Refseq:NM_026796
Nearest Ensembl:ENSMUSG00000026603
Gene Name:SET and MYND domain containing 2
Gene Alias:1110020E07Rik|4930402C15|KMT3C|Zmynd14
Gene Description:SET and MYND domain containing 2
Gene Type:protein-coding
CpG%:0.145
GC%:0.78607
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):