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Difference between revisions of "TSS:Mm 99400.1"

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Line 5: Line 5:
 
|AW545836=
 
|AW545836=
 
|UGRP=
 
|UGRP=
|all_trans=ENSMUST00000139995.1:0 AK165395:13 AY186239:19 ENSMUST00000131382.7:-56 NM_175935:-112 BC069959:-112 ENSMUST00000078975.7:-142 LF230832:-178 MA466409:-178 ENSMUST00000070334.9:-191 AK002966:-191 LF198914:-194 MA434491:-194 LF230834:412 MA466411:412 LF230835:488 MA466412:488
+
|all_trans=MGI:1915651
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.075
 
|cpg_percent=0.075
Line 27: Line 27:
 
|nearest_refseq=NM_175935
 
|nearest_refseq=NM_175935
 
|nearest_unigene=Mm.22385
 
|nearest_unigene=Mm.22385
|num_trans=17
+
|num_trans=68401
 
|species=mouse
 
|species=mouse
 
|start=102189810
 
|start=102189810

Latest revision as of 19:25, 28 July 2021

Basic information about the TSS


TSS ID:mm_99400.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:102189810
End:102189833
Strand:+
TSS Score:1
Start of the center position in the TSS region:102189821
End of the center position in the TSS region:102189822



Gene and protein annotation


Transcript_name:ENSMUST00000139995.1
Distance:0
GeneID:68401
HGNC/MGI_ID:MGI:1915651
UniProt_ID:
Gene_name:glucose 6 phosphatase, catalytic, 3
Gene_symbol:G6pc3
Gene_synonyms:0710001K01Rik
Gene_source:MGI:1915651



Transcript annotation


Transcript_name:ENSMUST00000139995.1
Distance:0
Num_trans:68401
All_trans:MGI:1915651



TATA-Box annotation


Distance to TSS:123
Nearest PromoterID:NM_175935
Entrez ID:68401
Nearest Unigene:Mm.22385
Nearest Refseq:NM_175935
Nearest Ensembl:ENSMUSG00000034793
Gene Name:glucose 6 phosphatase, catalytic, 3
Gene Alias:0710001K01Rik|AU019276|AU045429|AV128920|AW545836|UGRP
Gene Description:glucose 6 phosphatase, catalytic, 3
Gene Type:protein-coding
CpG%:0.075
GC%:0.676617
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-7(GGCTAGAAAGGG,-,0.00)