Personal tools

Difference between revisions of "TSS:Mm 99489.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|Mdc=
 
|Mdc=
|all_trans=ENSMUST00000103081.9:0 ENSMUST00000068150.6:0 NM_009613:0 NM_001110778:0 AK157926:0 BC054536:131 AB009676:158
+
|all_trans=MGI:1098667
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.155
 
|cpg_percent=0.155
Line 23: Line 23:
 
|nearest_refseq=NM_009613
 
|nearest_refseq=NM_009613
 
|nearest_unigene=Mm.89854
 
|nearest_unigene=Mm.89854
|num_trans=7
+
|num_trans=11488
 
|species=mouse
 
|species=mouse
 
|start=102761402
 
|start=102761402
 
|start_of_center_position=102761425
 
|start_of_center_position=102761425
 
|strand=+
 
|strand=+
|transcript_name=ENSMUST00000103081.9 ENSMUST00000068150.6 NM_009613 NM_001110778 AK157926
+
|transcript_name=ENSMUST00000103081.9 ENSMUST00000068150.6 AK157926
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=mm_99489.1
 
|tss_id=mm_99489.1

Latest revision as of 19:27, 28 July 2021

Basic information about the TSS


TSS ID:mm_99489.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:102761402
End:102761448
Strand:+
TSS Score:1
Start of the center position in the TSS region:102761425
End of the center position in the TSS region:102761426



Gene and protein annotation


Transcript_name:ENSMUST00000103081.9 ENSMUST00000068150.6 AK157926
Distance:0
GeneID:11488
HGNC/MGI_ID:MGI:1098667
UniProt_ID:Q3TZE2 Q7TQG7 Q9R1V4
Gene_name:a disintegrin and metallopeptidase domain 11
Gene_symbol:Adam11
Gene_synonyms:Mdc
Gene_source:MGI:1098667



Transcript annotation


Transcript_name:ENSMUST00000103081.9 ENSMUST00000068150.6 AK157926
Distance:0
Num_trans:11488
All_trans:MGI:1098667



TATA-Box annotation


Distance to TSS:-10
Nearest PromoterID:NM_009613
Entrez ID:11488
Nearest Unigene:Mm.89854
Nearest Refseq:NM_009613
Nearest Ensembl:ENSMUSG00000020926
Gene Name:a disintegrin and metallopeptidase domain 11
Gene Alias:AW060611|Mdc
Gene Description:a disintegrin and metallopeptidase domain 11
Gene Type:protein-coding
CpG%:0.155
GC%:0.80597
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):