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Difference between revisions of "TSS:Mm 99493.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000107073.7:-57 NM_001357580:-57 ENSMUST00000021302.14:337 NM_080846:337 BC005568:337 ENSMUST00000107072.1:487 AK009942:499
+
|all_trans=MGI:1922939
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 22: Line 22:
 
|nearest_refseq=NM_080846
 
|nearest_refseq=NM_080846
 
|nearest_unigene=Mm.44408
 
|nearest_unigene=Mm.44408
|num_trans=7
+
|num_trans=75689
 
|species=mouse
 
|species=mouse
 
|start=102835905
 
|start=102835905
 
|start_of_center_position=102835932
 
|start_of_center_position=102835932
 
|strand=+
 
|strand=+
|transcript_name=ENSMUST00000107073.7 NM_001357580
+
|transcript_name=ENSMUST00000107073.7
 
|tss_classification=no
 
|tss_classification=no
 
|tss_id=mm_99493.1
 
|tss_id=mm_99493.1

Latest revision as of 19:27, 28 July 2021

Basic information about the TSS


TSS ID:mm_99493.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:102835905
End:102835959
Strand:+
TSS Score:1
Start of the center position in the TSS region:102835932
End of the center position in the TSS region:102835933



Gene and protein annotation


Transcript_name:ENSMUST00000107073.7
Distance:-57
GeneID:75689
HGNC/MGI_ID:MGI:1922939
UniProt_ID:Q99JY6
Gene_name:HIG1 domain family, member 1B
Gene_symbol:Higd1b
Gene_synonyms:2310056K19Rik
Gene_source:MGI:1922939



Transcript annotation


Transcript_name:ENSMUST00000107073.7
Distance:-57
Num_trans:75689
All_trans:MGI:1922939



TATA-Box annotation


Distance to TSS:83
Nearest PromoterID:NM_001357580
Entrez ID:75689
Nearest Unigene:Mm.44408
Nearest Refseq:NM_080846
Nearest Ensembl:ENSMUSG00000020928
Gene Name:HIG1 domain family, member 1B
Gene Alias:2310056K19Rik
Gene Description:HIG1 domain family, member 1B
Gene Type:protein-coding
CpG%:0.02
GC%:0.502488
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):