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Difference between revisions of "TSS:Mm 99511.1"

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Line 2: Line 2:
 
|2010015A21Rik=
 
|2010015A21Rik=
 
|AI849317=
 
|AI849317=
|all_trans=ENSMUST00000129870.7:0 AK199070:23 ENSMUST00000139374.7:48 ENSMUST00000152971.1:50 AK008170:80 ENSMUST00000147701.1:82 ENSMUST00000142630.1:226 AK181561:251 AK183793:251 AK203233:251 AK148438:499
+
|all_trans=MGI:1914381
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.03
 
|cpg_percent=0.03
Line 24: Line 24:
 
|nearest_refseq=NM_025988
 
|nearest_refseq=NM_025988
 
|nearest_unigene=Mm.390367
 
|nearest_unigene=Mm.390367
|num_trans=11
+
|num_trans=67131
 
|species=mouse
 
|species=mouse
 
|start=103103015
 
|start=103103015

Latest revision as of 19:27, 28 July 2021

Basic information about the TSS


TSS ID:mm_99511.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:103103015
End:103103026
Strand:+
TSS Score:1
Start of the center position in the TSS region:103103020
End of the center position in the TSS region:103103021



Gene and protein annotation


Transcript_name:ENSMUST00000129870.7
Distance:0
GeneID:67131
HGNC/MGI_ID:MGI:1914381
UniProt_ID:E0CXU7
Gene_name:acyl-Coenzyme A binding domain containing 4
Gene_symbol:Acbd4
Gene_synonyms:2010009P05Rik 2010015A21Rik
Gene_source:MGI:1914381



Transcript annotation


Transcript_name:ENSMUST00000129870.7
Distance:0
Num_trans:67131
All_trans:MGI:1914381



TATA-Box annotation


Distance to TSS:1333
Nearest PromoterID:NM_025988
Entrez ID:67131
Nearest Unigene:Mm.390367
Nearest Refseq:NM_025988
Nearest Ensembl:ENSMUSG00000056938
Gene Name:acyl-Coenzyme A binding domain containing 4
Gene Alias:2010009P05Rik|2010015A21Rik|AI849317
Gene Description:acyl-Coenzyme A binding domain containing 4
Gene Type:protein-coding
CpG%:0.03
GC%:0.522388
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-33(GGGTATAAAAGA,-,0.00)