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Difference between revisions of "TSS:Mm 99558.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000057870.3:-9 BC147064:-45 BC147065:-45 NM_001033212:-70 AK141598:-70
+
|all_trans=MGI:2144486
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.11
 
|cpg_percent=0.11
Line 22: Line 22:
 
|nearest_refseq=NM_001033212
 
|nearest_refseq=NM_001033212
 
|nearest_unigene=Mm.44618
 
|nearest_unigene=Mm.44618
|num_trans=5
+
|num_trans=104582
 
|species=mouse
 
|species=mouse
 
|start=103649578
 
|start=103649578

Latest revision as of 19:28, 28 July 2021

Basic information about the TSS


TSS ID:mm_99558.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:103649578
End:103649585
Strand:+
TSS Score:1
Start of the center position in the TSS region:103649581
End of the center position in the TSS region:103649582



Gene and protein annotation


Transcript_name:ENSMUST00000057870.3
Distance:-9
GeneID:104582
HGNC/MGI_ID:MGI:2144486
UniProt_ID:B2RV63
Gene_name:reprimo-like
Gene_symbol:Rprml
Gene_synonyms:
Gene_source:MGI:2144486



Transcript annotation


Transcript_name:ENSMUST00000057870.3
Distance:-9
Num_trans:104582
All_trans:MGI:2144486



TATA-Box annotation


Distance to TSS:73
Nearest PromoterID:NM_001033212
Entrez ID:104582
Nearest Unigene:Mm.44618
Nearest Refseq:NM_001033212
Nearest Ensembl:ENSMUSG00000046215
Gene Name:reprimo-like
Gene Alias:AW049332
Gene Description:reprimo-like
Gene Type:protein-coding
CpG%:0.11
GC%:0.696517
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):