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Difference between revisions of "TSS:Mm 99579.1"

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Line 3: Line 3:
 
|Mtapt=
 
|Mtapt=
 
|Tau=
 
|Tau=
|all_trans=NM_001285455:-7 NM_001285454:-7 NM_001285456:-7 NM_010838:-7 NM_001038609:-7 M18775:-7 M18776:-7 AK078167:10 ENSMUST00000138384.7:26 AK038797:26 AK147636:27 ENSMUST00000145227.7:31 BC014748:45 ENSMUST00000106992.9:-53 ENSMUST00000106993.9:62 U12914:99 U12915:99 U12916:99 ENSMUST00000132977.7:120 ENSMUST00000146353.1:126 ENSMUST00000132245.7:128 ENSMUST00000100347.10:131
+
|all_trans=MGI:97180
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.135
 
|cpg_percent=0.135
Line 25: Line 25:
 
|nearest_refseq=NM_010838
 
|nearest_refseq=NM_010838
 
|nearest_unigene=Mm.1287
 
|nearest_unigene=Mm.1287
|num_trans=22
+
|num_trans=17762
 
|species=mouse
 
|species=mouse
 
|start=104231442
 
|start=104231442
 
|start_of_center_position=104231447
 
|start_of_center_position=104231447
 
|strand=+
 
|strand=+
|transcript_name=NM_001285455 NM_001285454 NM_001285456 NM_010838 NM_001038609 M18775 M18776
+
|transcript_name=M18775 M18776
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=mm_99579.1
 
|tss_id=mm_99579.1

Latest revision as of 19:29, 28 July 2021

Basic information about the TSS


TSS ID:mm_99579.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:104231442
End:104231453
Strand:+
TSS Score:1
Start of the center position in the TSS region:104231447
End of the center position in the TSS region:104231448



Gene and protein annotation


Transcript_name:M18775 M18776
Distance:-7
GeneID:17762
HGNC/MGI_ID:MGI:97180
UniProt_ID:P10637 Q3UH19 Q8C5K4
Gene_name:microtubule-associated protein tau
Gene_symbol:Mapt
Gene_synonyms:Mtapt Tau
Gene_source:MGI:97180



Transcript annotation


Transcript_name:M18775 M18776
Distance:-7
Num_trans:17762
All_trans:MGI:97180



TATA-Box annotation


Distance to TSS:12
Nearest PromoterID:NM_001285456
Entrez ID:17762
Nearest Unigene:Mm.1287
Nearest Refseq:NM_010838
Nearest Ensembl:ENSMUSG00000018411
Gene Name:microtubule-associated protein tau
Gene Alias:AI413597|AW045860|Mtapt|Tau
Gene Description:microtubule-associated protein tau
Gene Type:protein-coding
CpG%:0.135
GC%:0.771144
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):