Difference between revisions of "TSS:Mm 99605.1"
From referenceTSS
| Line 2: | Line 2: | ||
|OTTMUSG00000003182= | |OTTMUSG00000003182= | ||
|OTTMUSG00000003183= | |OTTMUSG00000003183= | ||
| − | |all_trans= | + | |all_trans=MGI:97267 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_010858 | |nearest_refseq=NM_010858 | ||
|nearest_unigene=Mm.390355 | |nearest_unigene=Mm.390355 | ||
| − | |num_trans= | + | |num_trans=17896 |
|species=mouse | |species=mouse | ||
|start=104576965 | |start=104576965 | ||
| Line 30: | Line 30: | ||
|strand=+ | |strand=+ | ||
|tata_box=-34(TGGTATAAAAGG,-,0.00) | |tata_box=-34(TGGTATAAAAGG,-,0.00) | ||
| − | |transcript_name=ENSMUST00000106957.7 | + | |transcript_name=ENSMUST00000106957.7 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99605.1 | |tss_id=mm_99605.1 | ||
Latest revision as of 19:29, 28 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 104576971 |
|---|---|
| End of the center position in the TSS region: | 104576972 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000106957.7 |
|---|---|
| Distance: | 7 |
| Num_trans: | 17896 |
| All_trans: | MGI:97267 |
TATA-Box annotation
| Distance to TSS: | -13 |
|---|---|
| Nearest PromoterID: | NM_001355754 |
| Entrez ID: | 17896 |
| Nearest Unigene: | Mm.390355 |
| Nearest Refseq: | NM_010858 |
| Nearest Ensembl: | ENSMUSG00000061086 |
| Gene Name: | myosin, light polypeptide 4 |
| Gene Alias: | ALC1|AMLC|ELC|ELC1a|GT1|MLC1EMB|MLC1a|Myla |
| Gene Description: | myosin, light polypeptide 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(TGGTATAAAAGG,-,0.00) |
