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Difference between revisions of "TSS:Mm 99626.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000021029.5:322 NM_001081046:335 BC050801:337 AK014861:342
+
|all_trans=MGI:1918144
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.005
 
|cpg_percent=0.005
Line 22: Line 22:
 
|nearest_refseq=NM_001081046
 
|nearest_refseq=NM_001081046
 
|nearest_unigene=Mm.87320
 
|nearest_unigene=Mm.87320
|num_trans=4
+
|num_trans=70894
 
|species=mouse
 
|species=mouse
 
|start=105091860
 
|start=105091860

Latest revision as of 19:30, 28 July 2021

Basic information about the TSS


TSS ID:mm_99626.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:105091860
End:105091884
Strand:+
TSS Score:1
Start of the center position in the TSS region:105091872
End of the center position in the TSS region:105091873



Gene and protein annotation


Transcript_name:ENSMUST00000021029.5
Distance:322
GeneID:70894
HGNC/MGI_ID:MGI:1918144
UniProt_ID:Q80X60
Gene_name:EF-hand calcium binding domain 3
Gene_symbol:Efcab3
Gene_synonyms:4921510J17Rik
Gene_source:MGI:1918144



Transcript annotation


Transcript_name:ENSMUST00000021029.5
Distance:322
Num_trans:70894
All_trans:MGI:1918144



TATA-Box annotation


Distance to TSS:-347
Nearest PromoterID:NM_001081046
Entrez ID:70894
Nearest Unigene:Mm.87320
Nearest Refseq:NM_001081046
Nearest Ensembl:ENSMUSG00000020690
Gene Name:EF-hand calcium binding domain 3
Gene Alias:4921510J17Rik
Gene Description:EF-hand calcium binding domain 3
Gene Type:protein-coding
CpG%:0.005
GC%:0.437811
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):