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Difference between revisions of "TSS:Mm 99635.1"

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Line 3: Line 3:
 
|PKUalpha=
 
|PKUalpha=
 
|Tlk=
 
|Tlk=
|all_trans=AK165667:-108 ENSMUST00000106941.8:-111 NM_001361996:-111 NM_001294330:-111 NM_001112705:-111 NM_001294329:-111 NM_001294334:-111 ENSMUST00000092537.9:130 AK014829:227 ENSMUST00000015107.12:254 ENSMUST00000145048.7:319 BC066198:319 ENSMUST00000126175.7:336 AK089925:336
+
|all_trans=MGI:1346023
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 25: Line 25:
 
|nearest_refseq=NM_011903
 
|nearest_refseq=NM_011903
 
|nearest_unigene=Mm.126976
 
|nearest_unigene=Mm.126976
|num_trans=14
+
|num_trans=24086
 
|species=mouse
 
|species=mouse
 
|start=105181637
 
|start=105181637

Latest revision as of 19:30, 28 July 2021

Basic information about the TSS


TSS ID:mm_99635.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:105181637
End:105181663
Strand:+
TSS Score:1
Start of the center position in the TSS region:105181650
End of the center position in the TSS region:105181651



Gene and protein annotation


Transcript_name:AK165667
Distance:-108
GeneID:24086
HGNC/MGI_ID:MGI:1346023
UniProt_ID:
Gene_name:tousled-like kinase 2 (Arabidopsis)
Gene_symbol:Tlk2
Gene_synonyms:4933403M19Rik PKUalpha protein_kinase_U-alpha
Gene_source:MGI:1346023



Transcript annotation


Transcript_name:AK165667
Distance:-108
Num_trans:24086
All_trans:MGI:1346023



TATA-Box annotation


Distance to TSS:123
Nearest PromoterID:NM_001294334
Entrez ID:24086
Nearest Unigene:Mm.126976
Nearest Refseq:NM_011903
Nearest Ensembl:ENSMUSG00000020694
Gene Name:tousled-like kinase 2 (Arabidopsis)
Gene Alias:4933403M19Rik|PKU-alpha|PKUalpha|Tlk
Gene Description:tousled-like kinase 2 (Arabidopsis)
Gene Type:protein-coding
CpG%:0.105
GC%:0.681592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):