Personal tools

Difference between revisions of "TSS:Mm 99643.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=U56734:0 AK028157:-7 ENSMUST00000021038.4:-10 BC116642:28 ENSMUST00000100335.9:-32 NM_008626:-32 ENSMUST00000126931.1:-35 AK054150:-35 LF198941:-36 MA434518:-36
+
|all_trans=MGI:107818
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 23: Line 23:
 
|nearest_refseq=NM_008626
 
|nearest_refseq=NM_008626
 
|nearest_unigene=Mm.235616
 
|nearest_unigene=Mm.235616
|num_trans=10
+
|num_trans=17534
 
|species=mouse
 
|species=mouse
 
|start=105292677
 
|start=105292677

Latest revision as of 19:30, 28 July 2021

Basic information about the TSS


TSS ID:mm_99643.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:105292677
End:105292692
Strand:+
TSS Score:1
Start of the center position in the TSS region:105292684
End of the center position in the TSS region:105292685



Gene and protein annotation


Transcript_name:U56734
Distance:0
GeneID:17534
HGNC/MGI_ID:MGI:107818
UniProt_ID:
Gene_name:mannose receptor, C type 2
Gene_symbol:Mrc2
Gene_synonyms:Endo180 novel_lectin uPARAP
Gene_source:MGI:107818



Transcript annotation


Transcript_name:U56734
Distance:0
Num_trans:17534
All_trans:MGI:107818



TATA-Box annotation


Distance to TSS:39
Nearest PromoterID:NM_008626
Entrez ID:17534
Nearest Unigene:Mm.235616
Nearest Refseq:NM_008626
Nearest Ensembl:ENSMUSG00000020695
Gene Name:mannose receptor, C type 2
Gene Alias:Endo180|mKIAA0709|uPARAP
Gene Description:mannose receptor, C type 2
Gene Type:protein-coding
CpG%:0.1
GC%:0.711443
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):